Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.71□□□□□ -1.49
CDH6P55285 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CDH6P55285 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CDH6P55285 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CDH6P55285 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 RN7SKP6-201ENST00000364795 319 ntBASIC5.71□□□□□ -1.5
CDH6P55285 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CDH6P55285 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH6P55285 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH6P55285 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.71□□□□□ -1.5
CDH6P55285 FMO7P-201ENST00000436045 768 ntBASIC5.71□□□□□ -1.5
CDH6P55285 AC064862.4-201ENST00000442180 334 ntBASIC5.71□□□□□ -1.5
CDH6P55285 AC092106.1-201ENST00000444291 373 ntBASIC5.71□□□□□ -1.5
CDH6P55285 RPL31P15-201ENST00000449770 338 ntBASIC5.71□□□□□ -1.5
CDH6P55285 LDHBP2-201ENST00000456969 1005 ntBASIC5.71□□□□□ -1.5
CDH6P55285 RN7SL72P-201ENST00000460697 269 ntBASIC5.71□□□□□ -1.5
CDH6P55285 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CDH6P55285 RNU6-1334P-201ENST00000516032 105 ntBASIC5.71□□□□□ -1.5
CDH6P55285 NRBF2P4-201ENST00000520874 850 ntBASIC5.71□□□□□ -1.5
CDH6P55285 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH6P55285 AL049872.1-201ENST00000556323 322 ntBASIC5.71□□□□□ -1.5
CDH6P55285 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH6P55285 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH6P55285 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 RNA5SP439-201ENST00000617595 124 ntBASIC5.71□□□□□ -1.5
CDH6P55285 AC007683.2-201ENST00000624681 714 ntBASIC5.71□□□□□ -1.5
CDH6P55285 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH6P55285 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH6P55285 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH6P55285 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CDH6P55285 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH6P55285 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 MTCO1P7-201ENST00000419523 1542 ntBASIC5.7□□□□□ -1.5
CDH6P55285 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 RNA5SP122-201ENST00000384457 108 ntBASIC5.7□□□□□ -1.5
CDH6P55285 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CDH6P55285 PPIAP9-201ENST00000403866 498 ntBASIC5.7□□□□□ -1.5
CDH6P55285 MGAT2P2-201ENST00000427194 797 ntBASIC5.7□□□□□ -1.5
CDH6P55285 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
CDH6P55285 RPL5P2-201ENST00000429598 854 ntBASIC5.7□□□□□ -1.5
CDH6P55285 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH6P55285 AC002504.1-201ENST00000438281 691 ntBASIC5.7□□□□□ -1.5
CDH6P55285 HMGN1P36-201ENST00000446623 298 ntBASIC5.7□□□□□ -1.5
CDH6P55285 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CDH6P55285 AC138866.2-201ENST00000508650 584 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH6P55285 AC112191.2-201ENST00000522428 333 ntBASIC5.7□□□□□ -1.5
CDH6P55285 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CDH6P55285 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH6P55285 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 AC008521.2-201ENST00000591021 259 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC012616.1-201ENST00000600294 197 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC010632.3-201ENST00000611377 369 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH6P55285 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC010809.3-201ENST00000621310 641 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC127024.6-201ENST00000621598 424 ntBASIC5.7□□□□□ -1.5
CDH6P55285 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDH6P55285 AC073869.8-201ENST00000641806 335 ntBASIC5.7□□□□□ -1.5
CDH6P55285 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH6P55285 AC016745.2-201ENST00000608834 3443 ntBASIC5.7□□□□□ -1.5
CDH6P55285 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH6P55285 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDH6P55285 AL022311.1-201ENST00000623726 19416 ntBASIC5.69□□□□□ -1.5
CDH6P55285 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH6P55285 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH6P55285 RNF19BPY-201ENST00000458209 1550 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms