Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.54□□□□□ -1.52
PDX1P52945 AC093763.2-201ENST00000505334 1223 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AP002981.1-201ENST00000517692 975 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC139365.2-201ENST00000517972 253 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.54□□□□□ -1.52
PDX1P52945 NRBF2P4-201ENST00000520874 850 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.54□□□□□ -1.52
PDX1P52945 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.54□□□□□ -1.52
PDX1P52945 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.54□□□□□ -1.52
PDX1P52945 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.54□□□□□ -1.52
PDX1P52945 AC010547.7-201ENST00000570323 333 ntBASIC5.54□□□□□ -1.52
PDX1P52945 MIR4260-201ENST00000583107 67 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 MIR6730-201ENST00000622213 67 ntBASIC5.54□□□□□ -1.52
PDX1P52945 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.54□□□□□ -1.52
PDX1P52945 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDX1P52945 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.54□□□□□ -1.52
PDX1P52945 CASC19-248ENST00000641674 1356 ntBASIC5.54□□□□□ -1.52
PDX1P52945 AC130304.1-201ENST00000622942 2385 ntBASIC5.53□□□□□ -1.52
PDX1P52945 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 SNORA74A-201ENST00000364089 198 ntBASIC5.53□□□□□ -1.52
PDX1P52945 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDX1P52945 SNORA70-201ENST00000384436 135 ntBASIC5.53□□□□□ -1.52
PDX1P52945 RNU6-316P-201ENST00000391027 107 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AP000534.2-201ENST00000412729 568 ntBASIC5.53□□□□□ -1.52
PDX1P52945 GABARAPL3-201ENST00000412799 354 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.53□□□□□ -1.52
PDX1P52945 RPL35AP24-201ENST00000413846 330 ntBASIC5.53□□□□□ -1.52
PDX1P52945 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
PDX1P52945 NANOGP4-201ENST00000427230 913 ntBASIC5.53□□□□□ -1.52
PDX1P52945 TRIM60P13-201ENST00000432350 1283 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC073410.1-201ENST00000435125 589 ntBASIC5.53□□□□□ -1.52
PDX1P52945 GAPDHP58-201ENST00000438477 1006 ntBASIC5.53□□□□□ -1.52
PDX1P52945 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.53□□□□□ -1.52
PDX1P52945 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 TPRKBP1-201ENST00000456243 481 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC100832.1-201ENST00000471945 383 ntBASIC5.53□□□□□ -1.52
PDX1P52945 DEFB109A-201ENST00000482450 265 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.53□□□□□ -1.52
PDX1P52945 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.53□□□□□ -1.52
PDX1P52945 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.53□□□□□ -1.52
PDX1P52945 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 AC063977.5-201ENST00000601044 974 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC118658.2-201ENST00000618697 459 ntBASIC5.53□□□□□ -1.52
PDX1P52945 MIR8080-201ENST00000622224 89 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC021766.1-201ENST00000624404 741 ntBASIC5.53□□□□□ -1.52
PDX1P52945 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 AC063952.1-203ENST00000634410 658 ntBASIC5.53□□□□□ -1.52
PDX1P52945 CASC19-264ENST00000641912 1184 ntBASIC5.53□□□□□ -1.52
PDX1P52945 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PDX1P52945 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDX1P52945 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PDX1P52945 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDX1P52945 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 GAPDHP24-201ENST00000328713 983 ntBASIC5.52□□□□□ -1.53
PDX1P52945 RMRPP5-201ENST00000411156 267 ntBASIC5.52□□□□□ -1.53
PDX1P52945 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.52□□□□□ -1.53
PDX1P52945 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms