Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.28□□□□□ -1.4
NEK3P51956 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 MTCO2P1-201ENST00000424648 477 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 PPIAP10-201ENST00000438675 458 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC092685.1-201ENST00000447960 1243 ntBASIC6.28□□□□□ -1.4
NEK3P51956 RANP2-201ENST00000456833 229 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC068228.1-201ENST00000461723 211 ntBASIC6.28□□□□□ -1.4
NEK3P51956 RPEP1-201ENST00000504507 658 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 AC090958.1-201ENST00000511122 351 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.28□□□□□ -1.4
NEK3P51956 PRMT5P1-201ENST00000514351 598 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.28□□□□□ -1.4
NEK3P51956 AP000859.1-201ENST00000525536 307 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.28□□□□□ -1.4
NEK3P51956 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 NDUFA5P11-201ENST00000567995 343 ntBASIC6.28□□□□□ -1.4
NEK3P51956 EIF1P5-201ENST00000585002 234 ntBASIC6.28□□□□□ -1.4
NEK3P51956 NPIPB1P-202ENST00000588786 828 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC133794.1-201ENST00000602731 914 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.28□□□□□ -1.4
NEK3P51956 AC005156.1-201ENST00000613371 573 ntBASIC6.28□□□□□ -1.4
NEK3P51956 RN7SL261P-201ENST00000613441 282 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC004477.3-201ENST00000614061 590 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 AC016957.2-201ENST00000616998 848 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AL445528.2-201ENST00000620582 470 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC069234.4-201ENST00000621276 412 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AL049777.1-201ENST00000622740 518 ntBASIC6.28□□□□□ -1.4
NEK3P51956 MIR1910-201ENST00000636955 80 ntBASIC6.28□□□□□ -1.4
NEK3P51956 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NEK3P51956 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 AP001541.1-201ENST00000623322 1904 ntBASIC6.28□□□□□ -1.4
NEK3P51956 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
NEK3P51956 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NEK3P51956 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.28□□□□□ -1.4
NEK3P51956 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
NEK3P51956 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.27□□□□□ -1.4
NEK3P51956 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AC022164.1-201ENST00000568767 2673 ntBASIC6.27□□□□□ -1.41
NEK3P51956 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NEK3P51956 RNU1-49P-201ENST00000363468 159 ntBASIC6.27□□□□□ -1.41
NEK3P51956 RPS27AP11-201ENST00000402798 447 ntBASIC6.27□□□□□ -1.41
NEK3P51956 SNORA77.2-201ENST00000408571 112 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 AC130360.1-201ENST00000425489 1117 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC115283.1-201ENST00000427353 400 ntBASIC6.27□□□□□ -1.41
NEK3P51956 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AC110602.1-201ENST00000437414 318 ntBASIC6.27□□□□□ -1.41
NEK3P51956 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 RPS10P18-201ENST00000442662 495 ntBASIC6.27□□□□□ -1.41
NEK3P51956 CYCSP42-201ENST00000450823 238 ntBASIC6.27□□□□□ -1.41
NEK3P51956 PPIAP7-201ENST00000454070 489 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.27□□□□□ -1.41
NEK3P51956 CST12P-201ENST00000457644 362 ntBASIC6.27□□□□□ -1.41
NEK3P51956 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.27□□□□□ -1.41
NEK3P51956 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.27□□□□□ -1.41
NEK3P51956 SNORA31.13-201ENST00000516624 135 ntBASIC6.27□□□□□ -1.41
NEK3P51956 RNA5SP400-201ENST00000517155 111 ntBASIC6.27□□□□□ -1.41
NEK3P51956 RN7SKP35-201ENST00000517210 151 ntBASIC6.27□□□□□ -1.41
NEK3P51956 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 AC130365.2-201ENST00000525882 1201 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AP000620.1-201ENST00000527147 504 ntBASIC6.27□□□□□ -1.41
NEK3P51956 EIF4A2P5-201ENST00000529914 499 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 AP001858.2-201ENST00000536213 601 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.27□□□□□ -1.41
NEK3P51956 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NEK3P51956 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.27□□□□□ -1.41
NEK3P51956 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.27□□□□□ -1.41
NEK3P51956 AC092332.1-201ENST00000563684 829 ntBASIC6.27□□□□□ -1.41
NEK3P51956 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.27□□□□□ -1.41
NEK3P51956 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms