Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMARCA4P51532 AL390879.1-201ENST00000439143 386 ntBASIC9.43□□□□□ -0.9
SMARCA4P51532 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.43□□□□□ -0.9
SMARCA4P51532 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 AC244107.2-201ENST00000611773 76 ntBASIC9.43□□□□□ -0.9
SMARCA4P51532 AC009704.2-201ENST00000618739 483 ntBASIC9.43□□□□□ -0.9
SMARCA4P51532 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC9.43□□□□□ -0.9
SMARCA4P51532 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
SMARCA4P51532 ALB-219ENST00000621085 1418 ntTSL 5 BASIC9.43□□□□□ -0.9
SMARCA4P51532 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.43□□□□□ -0.9
SMARCA4P51532 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
SMARCA4P51532 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
SMARCA4P51532 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SMARCA4P51532 RPL18P10-201ENST00000425606 538 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC007559.1-201ENST00000428736 355 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9.42□□□□□ -0.9
SMARCA4P51532 AC091153.1-201ENST00000466297 402 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 RN7SKP260-201ENST00000516907 149 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.42□□□□□ -0.9
SMARCA4P51532 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 ATP5A1P1-201ENST00000454088 1321 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
SMARCA4P51532 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 AC100757.1-201ENST00000616872 1835 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMARCA4P51532 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SMARCA4P51532 RNA5SP90-201ENST00000364801 99 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 MIR600-201ENST00000385007 98 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC004074.1-201ENST00000421810 1063 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 HSPD1P12-201ENST00000429127 1069 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AL359265.2-201ENST00000434367 631 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 AC023818.1-201ENST00000498379 384 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 GAPDHP56-201ENST00000506031 988 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC091912.1-201ENST00000511351 248 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 AC034205.1-201ENST00000520621 638 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC9.42□□□□□ -0.9
SMARCA4P51532 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC9.42□□□□□ -0.9
SMARCA4P51532 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC9.42□□□□□ -0.9
SMARCA4P51532 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SMARCA4P51532 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SMARCA4P51532 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 BX284613.1-201ENST00000452221 1641 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 AC011933.2-201ENST00000578539 2790 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SMARCA4P51532 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SMARCA4P51532 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SMARCA4P51532 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.41□□□□□ -0.9
SMARCA4P51532 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 RPL11P3-201ENST00000395256 523 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 GLULP6-201ENST00000399502 913 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 SCARNA20.4-201ENST00000516969 131 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.41□□□□□ -0.9
SMARCA4P51532 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC9.41□□□□□ -0.9
SMARCA4P51532 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 AC073869.8-201ENST00000641806 335 ntBASIC9.41□□□□□ -0.9
SMARCA4P51532 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SMARCA4P51532 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC9.41□□□□□ -0.9
SMARCA4P51532 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC9.41□□□□□ -0.9
SMARCA4P51532 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMARCA4P51532 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
SMARCA4P51532 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC9.4□□□□□ -0.9
SMARCA4P51532 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SMARCA4P51532 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
SMARCA4P51532 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA4P51532 PRPF38AP2-201ENST00000438179 851 ntBASIC9.4□□□□□ -0.9
SMARCA4P51532 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SMARCA4P51532 LINC02210-201ENST00000444561 288 ntBASIC9.4□□□□□ -0.9
SMARCA4P51532 AL161722.1-201ENST00000446972 1032 ntBASIC9.4□□□□□ -0.9
SMARCA4P51532 AC234781.3-201ENST00000452540 973 ntBASIC9.4□□□□□ -0.9
SMARCA4P51532 AC026979.1-201ENST00000492525 396 ntBASIC9.4□□□□□ -0.9
SMARCA4P51532 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC9.4□□□□□ -0.9
SMARCA4P51532 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC9.4□□□□□ -0.9
SMARCA4P51532 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.4□□□□□ -0.9
SMARCA4P51532 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms