Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RN7SKP28-201ENST00000364770 305 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCLP35914 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCLP35914 SMC4P1-201ENST00000414479 527 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 AC019185.1-201ENST00000442718 389 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCLP35914 AL358876.1-201ENST00000453364 1075 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 RN7SL583P-201ENST00000475692 287 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGCLP35914 AC111000.6-201ENST00000514471 709 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 OR4A17P-201ENST00000526032 904 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGCLP35914 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGCLP35914 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGCLP35914 AC020978.7-201ENST00000575953 1187 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCLP35914 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGCLP35914 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGCLP35914 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGCLP35914 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGCLP35914 AP005432.1-201ENST00000580891 3485 ntBASIC5.53□□□□□ -1.52
HMGCLP35914 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 AC092681.1-201ENST00000297369 291 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 RN7SKP185-201ENST00000362813 326 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCLP35914 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCLP35914 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCLP35914 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGCLP35914 AC092106.1-201ENST00000444291 373 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGCLP35914 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGCLP35914 AC015720.2-201ENST00000567709 334 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 AC009237.13-201ENST00000603193 276 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 AC104695.2-201ENST00000605056 775 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 AL139124.1-201ENST00000609123 421 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 AL512356.3-201ENST00000623005 461 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 AC132068.1-201ENST00000623805 459 ntBASIC5.52□□□□□ -1.53
HMGCLP35914 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
HMGCLP35914 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
HMGCLP35914 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGCLP35914 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMGCLP35914 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMGCLP35914 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 AL158827.1-201ENST00000416300 391 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 AC099670.2-201ENST00000435130 321 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 SETP20-201ENST00000457046 852 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC023141.9-201ENST00000458734 412 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 RN7SL717P-201ENST00000478343 297 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 DEFB109A-201ENST00000482450 265 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 RN7SL466P-201ENST00000497546 295 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCLP35914 AC111000.5-201ENST00000506559 1178 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC021106.1-201ENST00000509020 1058 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGCLP35914 AC020937.1-201ENST00000519677 1013 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 IGKV3D-34-201ENST00000522638 302 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCLP35914 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 AL118522.2-201ENST00000616045 615 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGCLP35914 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMGCLP35914 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGCLP35914 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGCLP35914 AC007342.5-201ENST00000571340 2142 ntBASIC5.51□□□□□ -1.53
HMGCLP35914 AC007938.2-201ENST00000604666 2634 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms