Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD13P35453 AP002884.5-201ENST00000595053 1132 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 AL592494.3-201ENST00000609485 464 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 AC107308.1-201ENST00000615897 301 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD13P35453 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 AC114786.1-201ENST00000512892 1415 ntBASIC6.14□□□□□ -1.43
HOXD13P35453 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD13P35453 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD13P35453 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXD13P35453 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD13P35453 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 AC025470.1-201ENST00000510053 2032 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 RN7SKP185-201ENST00000362813 326 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 RNA5SP510-201ENST00000364697 99 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 MTND3P20-201ENST00000407663 186 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 SNORA11.5-201ENST00000408163 128 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 RNU2-22P-201ENST00000411266 212 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AL512504.1-201ENST00000415494 778 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC079807.1-201ENST00000429993 481 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 FMO7P-201ENST00000436045 768 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 Z84478.1-201ENST00000438230 1219 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 RPL36AP39-201ENST00000445859 318 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 BUD31P2-201ENST00000449374 300 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 VDAC2P4-201ENST00000452925 711 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 RN7SL583P-201ENST00000475692 287 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC091544.1-201ENST00000484702 348 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 OR4V1P-201ENST00000525394 1140 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 MTND2P13-201ENST00000577438 1039 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD13P35453 AC125494.2-201ENST00000602431 657 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC012213.4-201ENST00000606457 354 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 CU639417.4-201ENST00000623928 207 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC119674.1-220ENST00000641502 1048 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 AC008691.1-209ENST00000642094 814 ntBASIC6.13□□□□□ -1.43
HOXD13P35453 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD13P35453 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD13P35453 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 RNA5SP46-201ENST00000362370 120 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 RNU11-201ENST00000387069 134 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AL031985.1-201ENST00000392713 418 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 NPM1P37-201ENST00000403105 874 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AL009179.1-201ENST00000406085 265 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC013470.3-201ENST00000420252 1194 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 TMEM183AP1-205ENST00000432739 290 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 NDUFA5P1-201ENST00000433858 341 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD13P35453 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC114878.1-201ENST00000441166 358 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AC019185.1-201ENST00000442718 389 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 HMGN1P36-201ENST00000446623 298 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 MTND3P4-201ENST00000453537 303 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 AC104629.2-201ENST00000468627 598 ntBASIC6.12□□□□□ -1.43
HOXD13P35453 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.12□□□□□ -1.43
HOXD13P35453 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD13P35453 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD13P35453 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms