Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC084824.2-201ENST00000548906 345 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.45□□□□□ -1.54
SHMT2P34897 DHFRP1-201ENST00000579682 559 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.45□□□□□ -1.54
SHMT2P34897 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 AC241377.1-201ENST00000619797 406 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHMT2P34897 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.45□□□□□ -1.54
SHMT2P34897 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SHMT2P34897 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHMT2P34897 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 RNA5SP242-201ENST00000364171 118 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 BX119904.3-201ENST00000428194 957 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 RN7SL101P-201ENST00000496350 279 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 AL136038.1-201ENST00000497246 351 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 RN7SL466P-201ENST00000497546 295 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.44□□□□□ -1.54
SHMT2P34897 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 AC106872.4-201ENST00000510050 523 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 IGLV3-24-201ENST00000517477 197 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.44□□□□□ -1.54
SHMT2P34897 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 MRPS21P7-201ENST00000566937 238 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.44□□□□□ -1.54
SHMT2P34897 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.44□□□□□ -1.54
SHMT2P34897 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 AC002069.2-201ENST00000603580 883 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 AC104695.2-201ENST00000605056 775 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.44□□□□□ -1.54
SHMT2P34897 AC004477.3-201ENST00000614061 590 ntBASIC5.44□□□□□ -1.54
SHMT2P34897 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHMT2P34897 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.44□□□□□ -1.54
SHMT2P34897 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.44□□□□□ -1.54
SHMT2P34897 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.44□□□□□ -1.54
SHMT2P34897 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHMT2P34897 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
SHMT2P34897 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 GAPDHP24-201ENST00000328713 983 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 RN7SKP269-201ENST00000365545 319 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 RNU4-2-201ENST00000365668 141 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 MIR551A-201ENST00000385042 96 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 CHEK2P5-201ENST00000423877 246 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 OR10T1P-201ENST00000424327 947 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 NANOGP9-201ENST00000439890 892 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 AL450023.1-201ENST00000450868 751 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 VDAC2P4-201ENST00000452925 711 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AP000547.1-201ENST00000454360 617 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.43□□□□□ -1.54
SHMT2P34897 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.43□□□□□ -1.54
SHMT2P34897 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 AC137627.1-201ENST00000545761 289 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.43□□□□□ -1.54
SHMT2P34897 MIR1273E-201ENST00000581165 102 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.43□□□□□ -1.54
SHMT2P34897 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 AL353684.1-201ENST00000622677 1120 ntBASIC5.43□□□□□ -1.54
SHMT2P34897 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms