Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.37□□□□□ -1.39
CIITAP33076 AP000949.1-201ENST00000438328 629 ntBASIC6.37□□□□□ -1.39
CIITAP33076 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 AC104849.1-201ENST00000462623 405 ntBASIC6.37□□□□□ -1.39
CIITAP33076 RPSAP39-201ENST00000467439 883 ntBASIC6.37□□□□□ -1.39
CIITAP33076 RN7SL466P-201ENST00000497546 295 ntBASIC6.37□□□□□ -1.39
CIITAP33076 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.37□□□□□ -1.39
CIITAP33076 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.37□□□□□ -1.39
CIITAP33076 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 PPATP2-201ENST00000605635 508 ntBASIC6.37□□□□□ -1.39
CIITAP33076 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.37□□□□□ -1.39
CIITAP33076 AC025574.2-201ENST00000615621 514 ntBASIC6.37□□□□□ -1.39
CIITAP33076 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.37□□□□□ -1.39
CIITAP33076 AL691477.1-201ENST00000624398 162 ntBASIC6.37□□□□□ -1.39
CIITAP33076 AC080188.3-201ENST00000624842 748 ntBASIC6.37□□□□□ -1.39
CIITAP33076 MIR4302-201ENST00000638058 60 ntBASIC6.37□□□□□ -1.39
CIITAP33076 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CIITAP33076 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 THAP12P8-201ENST00000447914 2115 ntBASIC6.37□□□□□ -1.39
CIITAP33076 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 NCOA4P2-201ENST00000340589 1813 ntBASIC6.36□□□□□ -1.39
CIITAP33076 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CIITAP33076 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CIITAP33076 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.36□□□□□ -1.39
CIITAP33076 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CIITAP33076 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.36□□□□□ -1.39
CIITAP33076 U3.10-201ENST00000364459 214 ntBASIC6.36□□□□□ -1.39
CIITAP33076 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CIITAP33076 AC092642.1-201ENST00000392417 425 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC005042.1-201ENST00000393397 800 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC096921.1-201ENST00000411661 375 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.36□□□□□ -1.39
CIITAP33076 SETP9-201ENST00000423837 832 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC106901.1-201ENST00000425086 698 ntBASIC6.36□□□□□ -1.39
CIITAP33076 NANOGP9-201ENST00000439890 892 ntBASIC6.36□□□□□ -1.39
CIITAP33076 DNAJC19P5-201ENST00000443295 316 ntBASIC6.36□□□□□ -1.39
CIITAP33076 RAD1P2-201ENST00000446414 663 ntBASIC6.36□□□□□ -1.39
CIITAP33076 VDAC2P4-201ENST00000452925 711 ntBASIC6.36□□□□□ -1.39
CIITAP33076 RPL37AP8-201ENST00000494116 276 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC106872.4-201ENST00000510050 523 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 MTND1P36-201ENST00000522384 936 ntBASIC6.36□□□□□ -1.39
CIITAP33076 NPM1P5-201ENST00000557228 838 ntBASIC6.36□□□□□ -1.39
CIITAP33076 MRPS21P7-201ENST00000566937 238 ntBASIC6.36□□□□□ -1.39
CIITAP33076 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 AL589674.2-201ENST00000604304 337 ntBASIC6.36□□□□□ -1.39
CIITAP33076 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.36□□□□□ -1.39
CIITAP33076 AC004808.2-201ENST00000627965 773 ntBASIC6.36□□□□□ -1.39
CIITAP33076 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CIITAP33076 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CIITAP33076 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CIITAP33076 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.36□□□□□ -1.39
CIITAP33076 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CIITAP33076 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CIITAP33076 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CIITAP33076 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CIITAP33076 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 AL929601.4-201ENST00000613011 1341 ntBASIC6.35□□□□□ -1.39
CIITAP33076 SAMMSON-210ENST00000641260 1308 ntBASIC6.35□□□□□ -1.39
CIITAP33076 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.35□□□□□ -1.39
CIITAP33076 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.35□□□□□ -1.39
CIITAP33076 MIR323A-201ENST00000362199 86 ntBASIC6.35□□□□□ -1.39
CIITAP33076 RNA5SP326-201ENST00000363209 110 ntBASIC6.35□□□□□ -1.39
CIITAP33076 RN7SKP124-201ENST00000364730 341 ntBASIC6.35□□□□□ -1.39
CIITAP33076 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.35□□□□□ -1.39
CIITAP33076 MTND2P9-201ENST00000422293 931 ntBASIC6.35□□□□□ -1.39
CIITAP33076 AC007161.1-204ENST00000423039 460 ntBASIC6.35□□□□□ -1.39
CIITAP33076 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 AL121776.1-201ENST00000429337 372 ntBASIC6.35□□□□□ -1.39
CIITAP33076 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.35□□□□□ -1.39
CIITAP33076 AC019185.1-201ENST00000442718 389 ntBASIC6.35□□□□□ -1.39
CIITAP33076 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.35□□□□□ -1.39
CIITAP33076 SNORD125-201ENST00000459538 96 ntBASIC6.35□□□□□ -1.39
CIITAP33076 RPS17P5-201ENST00000498293 408 ntBASIC6.35□□□□□ -1.39
CIITAP33076 GOLGA5P1-201ENST00000507317 980 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms