Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC000095.2-202ENST00000637415 154 ntBASIC8.56□□□□□ -1.04
CLIP1P30622 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
CLIP1P30622 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.56□□□□□ -1.04
CLIP1P30622 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.56□□□□□ -1.04
CLIP1P30622 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CLIP1P30622 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CLIP1P30622 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
CLIP1P30622 RNA5SP305-201ENST00000362665 119 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.55□□□□□ -1.04
CLIP1P30622 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.55□□□□□ -1.04
CLIP1P30622 H2AFZP6-201ENST00000444403 394 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 RN7SL423P-201ENST00000486202 304 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.55□□□□□ -1.04
CLIP1P30622 NDUFB5P1-201ENST00000508134 564 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.55□□□□□ -1.04
CLIP1P30622 SEPT10P1-201ENST00000517342 1162 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.55□□□□□ -1.04
CLIP1P30622 MIR4436B2-201ENST00000581415 91 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 MIR4436B1-201ENST00000583272 91 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.55□□□□□ -1.04
CLIP1P30622 AC006116.3-201ENST00000592968 361 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AL139124.1-201ENST00000609123 421 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 MIR6748-201ENST00000610433 71 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 AC016745.2-201ENST00000608834 3443 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CLIP1P30622 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CLIP1P30622 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CLIP1P30622 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.55□□□□□ -1.04
CLIP1P30622 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CLIP1P30622 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CLIP1P30622 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CLIP1P30622 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CLIP1P30622 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 U3.36-201ENST00000408418 213 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 EI24P4-201ENST00000423683 1078 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC099670.2-201ENST00000435130 321 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.54□□□□□ -1.04
CLIP1P30622 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.54□□□□□ -1.04
CLIP1P30622 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.54□□□□□ -1.04
CLIP1P30622 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 AC108738.1-201ENST00000603703 237 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC093388.1-201ENST00000609166 430 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC244107.2-201ENST00000611773 76 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 LINC01739-205ENST00000641890 573 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CLIP1P30622 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 HSPA8P18-201ENST00000439846 1928 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CLIP1P30622 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.54□□□□□ -1.04
CLIP1P30622 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CLIP1P30622 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CLIP1P30622 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.54□□□□□ -1.04
CLIP1P30622 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.54□□□□□ -1.04
CLIP1P30622 AL590762.4-201ENST00000425885 253 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 HIGD1AP8-201ENST00000453927 274 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 RPS18P6-201ENST00000476880 458 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 RN7SL97P-201ENST00000486780 299 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC109462.1-201ENST00000491087 368 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.54□□□□□ -1.04
CLIP1P30622 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.54□□□□□ -1.04
CLIP1P30622 AC024940.3-201ENST00000538551 316 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.54□□□□□ -1.04
CLIP1P30622 MIR4646-201ENST00000580775 63 ntBASIC8.54□□□□□ -1.04
CLIP1P30622 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.54□□□□□ -1.04
CLIP1P30622 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.54□□□□□ -1.04
CLIP1P30622 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.53□□□□□ -1.04
CLIP1P30622 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.53□□□□□ -1.04
CLIP1P30622 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CLIP1P30622 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC131971.1-201ENST00000332881 1482 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC114774.1-201ENST00000507410 1770 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms