Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SRRM1P3-201ENST00000426911 2678 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 RNA5SP453-201ENST00000362503 119 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 RNA5SP131-201ENST00000365452 119 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN3P26045 SNORA11.5-201ENST00000408163 128 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN3P26045 RMRPP5-201ENST00000411156 267 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AL158827.1-201ENST00000416300 391 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN3P26045 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN3P26045 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 AL138899.2-201ENST00000439139 499 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AC083899.1-201ENST00000454465 3819 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AC094085.1-201ENST00000468914 584 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AC087672.1-201ENST00000479876 766 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN3P26045 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN3P26045 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 RNU6-615P-201ENST00000516065 106 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 RN7SKP34-201ENST00000516142 244 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 IGKV2-4-201ENST00000523070 340 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN3P26045 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN3P26045 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 NDUFA5P11-201ENST00000567995 343 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 AC027243.2-201ENST00000602530 724 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AL365181.4-201ENST00000609800 547 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 AL390318.1-201ENST00000624564 687 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 AL138820.1-201ENST00000617901 5305 ntBASIC5.72□□□□□ -1.49
PTPN3P26045 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN3P26045 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PTPN3P26045 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN3P26045 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN3P26045 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTPN3P26045 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PTPN3P26045 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 AL353625.1-202ENST00000366273 571 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 OR13C3-201ENST00000374781 1108 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN3P26045 AL009179.1-201ENST00000406085 265 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AL445213.1-201ENST00000412589 747 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN3P26045 RCC2P2-201ENST00000422174 918 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN3P26045 AC002069.1-201ENST00000429649 1159 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 RAD1P2-201ENST00000446414 663 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AL445665.1-202ENST00000452436 324 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN3P26045 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN3P26045 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN3P26045 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN3P26045 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 DUX4L52-201ENST00000549363 777 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN3P26045 AC079600.1-201ENST00000550326 297 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
PTPN3P26045 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN3P26045 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN3P26045 AP001496.3-201ENST00000580230 913 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AP002884.5-201ENST00000595053 1132 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AC100767.2-201ENST00000604840 693 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AL031658.2-201ENST00000616850 651 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 AL590410.1-201ENST00000617925 333 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN3P26045 MIR1910-201ENST00000636955 80 ntBASIC5.71□□□□□ -1.5
PTPN3P26045 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN3P26045 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN3P26045 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN3P26045 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN3P26045 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms