Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH3P22223 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH3P22223 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH3P22223 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 AC144833.1-201ENST00000567953 4089 ntBASIC5.65□□□□□ -1.5
CDH3P22223 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH3P22223 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH3P22223 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH3P22223 AC019072.1-201ENST00000604535 1551 ntBASIC5.65□□□□□ -1.5
CDH3P22223 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH3P22223 MIR375-201ENST00000362103 64 ntBASIC5.65□□□□□ -1.5
CDH3P22223 U3.10-201ENST00000364459 214 ntBASIC5.65□□□□□ -1.5
CDH3P22223 RNA5SP500-201ENST00000364486 119 ntBASIC5.65□□□□□ -1.5
CDH3P22223 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDH3P22223 MIR137-201ENST00000385223 102 ntBASIC5.65□□□□□ -1.5
CDH3P22223 SNORA17A-201ENST00000391185 133 ntBASIC5.65□□□□□ -1.5
CDH3P22223 OR7E101P-201ENST00000400428 513 ntBASIC5.65□□□□□ -1.5
CDH3P22223 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 PTP4A1P1-201ENST00000420539 515 ntBASIC5.65□□□□□ -1.5
CDH3P22223 BX119321.1-201ENST00000428912 797 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 RPL36AP39-201ENST00000445859 318 ntBASIC5.65□□□□□ -1.5
CDH3P22223 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH3P22223 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH3P22223 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH3P22223 AC093166.4-201ENST00000457867 318 ntBASIC5.65□□□□□ -1.5
CDH3P22223 NXT1P1-201ENST00000458481 316 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AL603882.1-201ENST00000463059 681 ntBASIC5.65□□□□□ -1.5
CDH3P22223 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH3P22223 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH3P22223 OR2A3P-201ENST00000493774 953 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH3P22223 IGKV3D-34-201ENST00000522638 302 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH3P22223 HMGN2P36-201ENST00000529541 409 ntBASIC5.65□□□□□ -1.5
CDH3P22223 OR4A43P-201ENST00000532938 908 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH3P22223 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH3P22223 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AP001496.3-201ENST00000580230 913 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AL118556.2-201ENST00000614375 824 ntBASIC5.65□□□□□ -1.5
CDH3P22223 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH3P22223 SNORA17.5-201ENST00000630429 132 ntBASIC5.65□□□□□ -1.5
CDH3P22223 AC103703.1-201ENST00000634783 663 ntBASIC5.65□□□□□ -1.5
CDH3P22223 OR11H2-202ENST00000641517 1085 ntBASIC5.65□□□□□ -1.5
CDH3P22223 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CDH3P22223 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH3P22223 AC002525.1-201ENST00000624392 1622 ntBASIC5.65□□□□□ -1.51
CDH3P22223 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH3P22223 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.65□□□□□ -1.51
CDH3P22223 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH3P22223 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH3P22223 SMG1P7-201ENST00000565246 2704 ntBASIC5.65□□□□□ -1.51
CDH3P22223 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH3P22223 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH3P22223 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH3P22223 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH3P22223 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 HSPD1P7-201ENST00000447985 1686 ntBASIC5.64□□□□□ -1.51
CDH3P22223 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 AC092642.1-201ENST00000392417 425 ntBASIC5.64□□□□□ -1.51
CDH3P22223 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 RNA5SP178-201ENST00000410380 128 ntBASIC5.64□□□□□ -1.51
CDH3P22223 RN7SKP29-201ENST00000410957 272 ntBASIC5.64□□□□□ -1.51
CDH3P22223 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH3P22223 MRPL53P1-201ENST00000414323 319 ntBASIC5.64□□□□□ -1.51
CDH3P22223 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 AL161636.2-201ENST00000445179 927 ntBASIC5.64□□□□□ -1.51
CDH3P22223 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH3P22223 RNU1-88P-201ENST00000459274 128 ntBASIC5.64□□□□□ -1.51
CDH3P22223 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 NENFP3-201ENST00000503735 313 ntBASIC5.64□□□□□ -1.51
CDH3P22223 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH3P22223 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH3P22223 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
CDH3P22223 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CDH3P22223 MIR4260-201ENST00000583107 67 ntBASIC5.64□□□□□ -1.51
CDH3P22223 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 AC092944.2-201ENST00000605443 889 ntBASIC5.64□□□□□ -1.51
CDH3P22223 SNORA35B-201ENST00000607417 129 ntBASIC5.64□□□□□ -1.51
CDH3P22223 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.64□□□□□ -1.51
CDH3P22223 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms