Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.53□□□□□ -1.68
CXCL3P19876 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 AL358876.1-201ENST00000453364 1075 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CXCL3P19876 RNU7-157P-201ENST00000459600 66 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 H3F3AP5-201ENST00000475267 429 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 AC093827.1-201ENST00000480094 861 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL3P19876 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL3P19876 AC036111.2-201ENST00000533247 901 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL3P19876 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL3P19876 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL3P19876 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.53□□□□□ -1.68
CXCL3P19876 MIR4311-201ENST00000580794 100 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 H3F3BP2-201ENST00000583907 357 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 AP000769.2-201ENST00000602344 396 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 RPSAP75-201ENST00000605848 301 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CXCL3P19876 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.53□□□□□ -1.68
CXCL3P19876 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CXCL3P19876 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 AC079298.1-201ENST00000625026 1619 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 AC063976.2-201ENST00000425667 3556 ntBASIC4.53□□□□□ -1.68
CXCL3P19876 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CXCL3P19876 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CXCL3P19876 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.53□□□□□ -1.69
CXCL3P19876 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.53□□□□□ -1.69
CXCL3P19876 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL3P19876 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CXCL3P19876 MTHFD2P5-201ENST00000320415 844 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 RNA5SP279-201ENST00000365513 117 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AL009179.1-201ENST00000406085 265 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 RN7SKP29-201ENST00000410957 272 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC007161.1-204ENST00000423039 460 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 PRUNEP1-201ENST00000425846 705 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CXCL3P19876 FTLP19-201ENST00000433300 394 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC011225.1-201ENST00000457751 369 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AC093166.4-201ENST00000457867 318 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 RN7SL583P-201ENST00000475692 287 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 RPL12P30-201ENST00000488389 499 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC138517.1-201ENST00000515724 568 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AC113191.1-201ENST00000517759 403 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.52□□□□□ -1.69
CXCL3P19876 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.52□□□□□ -1.69
CXCL3P19876 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 HSPE1P2-201ENST00000554777 306 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.52□□□□□ -1.69
CXCL3P19876 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AL139041.1-201ENST00000605480 610 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 AC129915.3-201ENST00000634128 948 ntBASIC4.52□□□□□ -1.69
CXCL3P19876 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.52□□□□□ -1.69
CXCL3P19876 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CXCL3P19876 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 294.3 ms