| TFE3 | P19532 | Y_RNA.553-201 | ENST00000384670 | 102 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC01442-201 | ENST00000414201 | 704 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL020993.1-201 | ENST00000420172 | 297 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RPS7P12-201 | ENST00000422385 | 582 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL135785.1-201 | ENST00000422554 | 399 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AHCYP8-201 | ENST00000425108 | 209 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC023469.2-201 | ENST00000425983 | 657 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC017048.2-201 | ENST00000431455 | 822 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC116038.1-201 | ENST00000432250 | 408 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL358972.1-201 | ENST00000434356 | 466 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC108051.1-201 | ENST00000435291 | 549 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | DSCAM-IT1-201 | ENST00000440363 | 720 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL365258.1-201 | ENST00000440885 | 247 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | Z99127.1-201 | ENST00000452442 | 670 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | XACT-201 | ENST00000468762 | 497 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC026254.2-201 | ENST00000475295 | 371 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC037198.2-201 | ENST00000478845 | 733 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC079080.1-201 | ENST00000479841 | 822 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CREM-242 | ENST00000490511 | 469 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RN7SL350P-201 | ENST00000492591 | 299 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RPS6P4-201 | ENST00000494693 | 758 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CDH12P2-201 | ENST00000504393 | 298 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC091849.1-201 | ENST00000509920 | 121 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC104108.1-201 | ENST00000509930 | 412 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | HNRNPKP5-201 | ENST00000515300 | 253 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RNU6-720P-201 | ENST00000516363 | 108 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC087360.1-201 | ENST00000518788 | 616 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NDUFA5P2-201 | ENST00000519723 | 344 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC073487.1-201 | ENST00000547009 | 529 nt | TSL 4 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC011603.2-202 | ENST00000552893 | 504 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | C14orf119-202 | ENST00000554203 | 725 nt | APPRIS P1 TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | MDFIC2-201 | ENST00000567252 | 778 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AP005671.1-201 | ENST00000581798 | 463 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC015818.6-201 | ENST00000584274 | 634 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC01899-203 | ENST00000584810 | 337 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC00906-202 | ENST00000587998 | 648 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC006305.3-201 | ENST00000590589 | 454 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC005332.10-201 | ENST00000612725 | 619 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC092794.1-201 | ENST00000612734 | 582 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL139418.1-201 | ENST00000613613 | 177 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC015540.1-201 | ENST00000615828 | 501 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | Metazoa_SRP.129-201 | ENST00000619776 | 251 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC008443.7-201 | ENST00000622195 | 246 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC024475.3-203 | ENST00000634971 | 854 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL034408.1-201 | ENST00000637712 | 664 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AP3S1-209 | ENST00000640413 | 489 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | ZNF780A-203 | ENST00000450241 | 7500 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NDC80-201 | ENST00000261597 | 2172 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | TTLL5-217 | ENST00000556893 | 3071 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | DST-220 | ENST00000518935 | 3547 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | OSER1-202 | ENST00000372970 | 1616 nt | APPRIS P1 TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LCA5L-203 | ENST00000380671 | 2080 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CNIH1-201 | ENST00000216416 | 4793 nt | APPRIS P2 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | ANKFN1-201 | ENST00000318698 | 2426 nt | APPRIS P2 TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CDY2A-201 | ENST00000250838 | 1954 nt | APPRIS ALT1 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CABS1-201 | ENST00000273936 | 1532 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | TCF12-213 | ENST00000559703 | 1544 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | HHLA2-210 | ENST00000491820 | 1439 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC092111.2-201 | ENST00000611627 | 1414 nt | BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC00862-204 | ENST00000637098 | 1400 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | ALMS1-IT1-201 | ENST00000441587 | 2107 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | PAK3-203 | ENST00000372007 | 8940 nt | APPRIS P3 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | MEF2C-226 | ENST00000625674 | 4343 nt | APPRIS P3 TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | FAM19A1-201 | ENST00000478136 | 2014 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC00616-205 | ENST00000514600 | 2017 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CR1-203 | ENST00000367051 | 7469 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NCOA6-202 | ENST00000374796 | 9311 nt | APPRIS P3 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | SLFN14-201 | ENST00000415846 | 2889 nt | APPRIS P1 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NRP1-205 | ENST00000374823 | 3737 nt | TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NAPG-201 | ENST00000322897 | 3548 nt | APPRIS P1 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RAB6C-AS1-201 | ENST00000412425 | 2454 nt | TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | PCBP1-AS1-210 | ENST00000416395 | 2451 nt | TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | SCN1A-204 | ENST00000423058 | 8191 nt | APPRIS ALT1 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | ZC2HC1B-201 | ENST00000237275 | 1002 nt | APPRIS P1 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LALBA-201 | ENST00000301046 | 728 nt | APPRIS P1 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | OR13F1-201 | ENST00000334726 | 960 nt | APPRIS P1 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RNU1-24P-201 | ENST00000364285 | 165 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RNU6-517P-201 | ENST00000384362 | 110 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | UBBP1-201 | ENST00000392399 | 473 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | SERHL2-204 | ENST00000407614 | 521 nt | TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CBX1P3-201 | ENST00000413296 | 527 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC097717.1-228 | ENST00000417006 | 754 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | NPM1P11-201 | ENST00000417106 | 855 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC022173.1-201 | ENST00000418554 | 577 nt | TSL 4 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | PAICSP7-201 | ENST00000419829 | 962 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | MTND4LP11-201 | ENST00000422184 | 280 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL021026.1-201 | ENST00000422841 | 658 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | USP9YP31-201 | ENST00000431405 | 881 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | LINC01680-201 | ENST00000434983 | 299 nt | TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AL109807.1-201 | ENST00000438222 | 569 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | GTF3AP5-201 | ENST00000442645 | 697 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | MOB4-207 | ENST00000448447 | 1021 nt | TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC073326.1-201 | ENST00000451832 | 557 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | CALM1P2-201 | ENST00000452941 | 448 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | SUN3-208 | ENST00000453192 | 801 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RPL26P30-201 | ENST00000453533 | 435 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | AC104233.1-201 | ENST00000458107 | 339 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | TFP1-201 | ENST00000460564 | 572 nt | TSL 4 BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | RPSAP24-201 | ENST00000461543 | 873 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| TFE3 | P19532 | PGAP2-210 | ENST00000464441 | 699 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |