Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC010624.4-201ENST00000597606 1351 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.53□□□□□ -1.2
LIG1P18858 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AL355377.1-201ENST00000621125 1653 ntBASIC7.53□□□□□ -1.2
LIG1P18858 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AC004014.2-201ENST00000623718 5122 ntBASIC7.53□□□□□ -1.2
LIG1P18858 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
LIG1P18858 AC005702.3-201ENST00000585345 1447 ntBASIC7.52□□□□□ -1.2
LIG1P18858 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
LIG1P18858 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
LIG1P18858 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.52□□□□□ -1.2
LIG1P18858 MTND5P11-201ENST00000511037 1812 ntBASIC7.52□□□□□ -1.2
LIG1P18858 BX005019.1-201ENST00000561881 1810 ntBASIC7.52□□□□□ -1.2
LIG1P18858 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
LIG1P18858 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.52□□□□□ -1.21
LIG1P18858 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC006511.3-201ENST00000624929 1783 ntBASIC7.52□□□□□ -1.21
LIG1P18858 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LIG1P18858 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LIG1P18858 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LIG1P18858 RPL7P27-201ENST00000403775 720 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AL589994.1-201ENST00000404962 340 ntBASIC7.52□□□□□ -1.21
LIG1P18858 SEPT7P8-201ENST00000413308 775 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.52□□□□□ -1.21
LIG1P18858 RPS7P12-201ENST00000422385 582 ntBASIC7.52□□□□□ -1.21
LIG1P18858 GAPDHP57-201ENST00000424400 585 ntBASIC7.52□□□□□ -1.21
LIG1P18858 RPL6P30-201ENST00000443382 862 ntBASIC7.52□□□□□ -1.21
LIG1P18858 VN1R32P-201ENST00000452234 905 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AC104849.1-201ENST00000462623 405 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AC104689.1-201ENST00000473356 768 ntBASIC7.52□□□□□ -1.21
LIG1P18858 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC022415.1-202ENST00000486612 523 ntBASIC7.52□□□□□ -1.21
LIG1P18858 RPL17P2-201ENST00000491913 451 ntBASIC7.52□□□□□ -1.21
LIG1P18858 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
LIG1P18858 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC138938.1-201ENST00000515431 782 ntBASIC7.52□□□□□ -1.21
LIG1P18858 NDUFS5P6-201ENST00000529136 295 ntBASIC7.52□□□□□ -1.21
LIG1P18858 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC7.52□□□□□ -1.21
LIG1P18858 AC007115.1-201ENST00000546853 234 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AL121579.2-201ENST00000555466 590 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AC023813.2-201ENST00000564321 469 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AC007346.1-201ENST00000569208 867 ntBASIC7.52□□□□□ -1.21
LIG1P18858 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.52□□□□□ -1.21
LIG1P18858 AC015802.2-201ENST00000589690 189 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AC073333.2-201ENST00000603589 769 ntBASIC7.52□□□□□ -1.21
LIG1P18858 AL356986.1-201ENST00000604085 341 ntBASIC7.52□□□□□ -1.21
LIG1P18858 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC099654.15-201ENST00000639802 509 ntBASIC7.52□□□□□ -1.21
LIG1P18858 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.52□□□□□ -1.21
LIG1P18858 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.52□□□□□ -1.21
LIG1P18858 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.52□□□□□ -1.21
LIG1P18858 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.52□□□□□ -1.21
LIG1P18858 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LIG1P18858 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 AC007382.1-201ENST00000624376 2618 ntBASIC7.51□□□□□ -1.21
LIG1P18858 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
LIG1P18858 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG1P18858 Y_RNA.472-201ENST00000384322 102 ntBASIC7.51□□□□□ -1.21
LIG1P18858 RNU6-83P-201ENST00000384568 112 ntBASIC7.51□□□□□ -1.21
LIG1P18858 RNA5SP474-201ENST00000391234 90 ntBASIC7.51□□□□□ -1.21
LIG1P18858 AL023284.3-201ENST00000407767 334 ntBASIC7.51□□□□□ -1.21
LIG1P18858 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.51□□□□□ -1.21
LIG1P18858 RN7SKP91-201ENST00000410852 288 ntBASIC7.51□□□□□ -1.21
LIG1P18858 RPLP1P10-201ENST00000413972 339 ntBASIC7.51□□□□□ -1.21
LIG1P18858 PTPN2P1-201ENST00000423212 1072 ntBASIC7.51□□□□□ -1.21
LIG1P18858 IFNNP1-201ENST00000429219 553 ntBASIC7.51□□□□□ -1.21
LIG1P18858 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.51□□□□□ -1.21
LIG1P18858 AC092393.1-201ENST00000439625 742 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms