Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 AC007161.1-204ENST00000423039 460 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AL354766.1-201ENST00000423396 542 ntBASIC6.5□□□□□ -1.37
TOP1P11387 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.5□□□□□ -1.37
TOP1P11387 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.5□□□□□ -1.37
TOP1P11387 AC138761.5-201ENST00000433967 325 ntBASIC6.5□□□□□ -1.37
TOP1P11387 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 AC007386.1-201ENST00000455212 582 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AC108751.3-201ENST00000461814 1020 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AL133445.1-201ENST00000467051 452 ntBASIC6.5□□□□□ -1.37
TOP1P11387 RPS26P39-201ENST00000469206 341 ntBASIC6.5□□□□□ -1.37
TOP1P11387 RN7SL583P-201ENST00000475692 287 ntBASIC6.5□□□□□ -1.37
TOP1P11387 GLUD1P3-202ENST00000508551 200 ntBASIC6.5□□□□□ -1.37
TOP1P11387 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.5□□□□□ -1.37
TOP1P11387 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TOP1P11387 AP000619.2-201ENST00000546014 969 ntBASIC6.5□□□□□ -1.37
TOP1P11387 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 AC084824.2-201ENST00000548906 345 ntBASIC6.5□□□□□ -1.37
TOP1P11387 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 MIR4489-201ENST00000578869 62 ntBASIC6.5□□□□□ -1.37
TOP1P11387 H3F3BP2-201ENST00000583907 357 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AL512624.1-201ENST00000613638 469 ntBASIC6.5□□□□□ -1.37
TOP1P11387 AL359513.1-201ENST00000614364 557 ntBASIC6.5□□□□□ -1.37
TOP1P11387 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.5□□□□□ -1.37
TOP1P11387 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TOP1P11387 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.5□□□□□ -1.37
TOP1P11387 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.5□□□□□ -1.37
TOP1P11387 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TOP1P11387 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TOP1P11387 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.5□□□□□ -1.37
TOP1P11387 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.5□□□□□ -1.37
TOP1P11387 CIR1P2-201ENST00000514821 1342 ntBASIC6.5□□□□□ -1.37
TOP1P11387 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.49□□□□□ -1.37
TOP1P11387 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 HSPD1P7-201ENST00000447985 1686 ntBASIC6.49□□□□□ -1.37
TOP1P11387 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TOP1P11387 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.49□□□□□ -1.37
TOP1P11387 AL161912.4-201ENST00000623889 2468 ntBASIC6.49□□□□□ -1.37
TOP1P11387 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP1P11387 Z93019.1-201ENST00000416450 973 ntBASIC6.49□□□□□ -1.37
TOP1P11387 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.49□□□□□ -1.37
TOP1P11387 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.49□□□□□ -1.37
TOP1P11387 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP1P11387 RN7SL51P-201ENST00000468230 285 ntBASIC6.49□□□□□ -1.37
TOP1P11387 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TOP1P11387 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP1P11387 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP1P11387 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.49□□□□□ -1.37
TOP1P11387 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP1P11387 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.49□□□□□ -1.37
TOP1P11387 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
TOP1P11387 SUGT1P3-202ENST00000604259 383 ntBASIC6.49□□□□□ -1.37
TOP1P11387 AC015712.7-201ENST00000615211 635 ntBASIC6.49□□□□□ -1.37
TOP1P11387 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 AC005618.4-201ENST00000625053 554 ntBASIC6.49□□□□□ -1.37
TOP1P11387 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.49□□□□□ -1.37
TOP1P11387 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP1P11387 AC018628.1-201ENST00000624147 3819 ntBASIC6.49□□□□□ -1.37
TOP1P11387 UGT2B24P-201ENST00000514441 1597 ntBASIC6.48□□□□□ -1.37
TOP1P11387 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
TOP1P11387 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 OR4F13P-202ENST00000560066 2054 ntBASIC6.48□□□□□ -1.37
TOP1P11387 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP1P11387 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 NPM1P4-201ENST00000414095 812 ntBASIC6.48□□□□□ -1.37
TOP1P11387 RANP7-201ENST00000418085 644 ntBASIC6.48□□□□□ -1.37
TOP1P11387 AC009506.2-201ENST00000420635 840 ntBASIC6.48□□□□□ -1.37
TOP1P11387 OR10T1P-201ENST00000424327 947 ntBASIC6.48□□□□□ -1.37
TOP1P11387 AC092106.1-201ENST00000444291 373 ntBASIC6.48□□□□□ -1.37
TOP1P11387 SNORD125-201ENST00000459538 96 ntBASIC6.48□□□□□ -1.37
TOP1P11387 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP1P11387 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 GAPDHP62-201ENST00000515313 990 ntBASIC6.48□□□□□ -1.37
TOP1P11387 BX510359.5-201ENST00000515651 304 ntBASIC6.48□□□□□ -1.37
TOP1P11387 SCARNA21.2-201ENST00000516600 166 ntBASIC6.48□□□□□ -1.37
TOP1P11387 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP1P11387 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TOP1P11387 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP1P11387 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.48□□□□□ -1.37
TOP1P11387 AC090022.1-201ENST00000546569 311 ntBASIC6.48□□□□□ -1.37
TOP1P11387 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.48□□□□□ -1.37
TOP1P11387 AC116158.1-201ENST00000560231 2129 ntBASIC6.48□□□□□ -1.37
TOP1P11387 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.48□□□□□ -1.37
TOP1P11387 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.48□□□□□ -1.37
TOP1P11387 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP1P11387 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms