Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM1P09493 Z82198.3-201ENST00000421145 199 ntBASIC6.04□□□□□ -1.44
TPM1P09493 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TPM1P09493 RPL19P16-201ENST00000433839 588 ntBASIC6.04□□□□□ -1.44
TPM1P09493 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 UBFD1P1-201ENST00000473259 814 ntBASIC6.04□□□□□ -1.44
TPM1P09493 AC009120.1-201ENST00000493458 473 ntBASIC6.04□□□□□ -1.44
TPM1P09493 MYL12BP2-201ENST00000503948 512 ntBASIC6.04□□□□□ -1.44
TPM1P09493 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 DPRXP4-201ENST00000578053 568 ntBASIC6.04□□□□□ -1.44
TPM1P09493 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.04□□□□□ -1.44
TPM1P09493 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.04□□□□□ -1.44
TPM1P09493 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
TPM1P09493 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.04□□□□□ -1.44
TPM1P09493 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TPM1P09493 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 AL162456.1-201ENST00000634535 2006 ntBASIC6.04□□□□□ -1.44
TPM1P09493 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TPM1P09493 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.04□□□□□ -1.44
TPM1P09493 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
TPM1P09493 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.04□□□□□ -1.44
TPM1P09493 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TPM1P09493 OR1L6-202ENST00000373684 1044 ntBASIC6.03□□□□□ -1.44
TPM1P09493 MIR191-201ENST00000384873 92 ntBASIC6.03□□□□□ -1.44
TPM1P09493 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TPM1P09493 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 OOSP1-201ENST00000398992 1270 ntBASIC6.03□□□□□ -1.44
TPM1P09493 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 VN1R110P-201ENST00000438988 971 ntBASIC6.03□□□□□ -1.44
TPM1P09493 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.03□□□□□ -1.44
TPM1P09493 AC073909.1-201ENST00000447112 999 ntBASIC6.03□□□□□ -1.44
TPM1P09493 RPL5P22-201ENST00000480199 884 ntBASIC6.03□□□□□ -1.44
TPM1P09493 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 NACAP5-201ENST00000509863 636 ntBASIC6.03□□□□□ -1.44
TPM1P09493 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 IGLV3-30-201ENST00000524362 298 ntBASIC6.03□□□□□ -1.44
TPM1P09493 AP001000.1-201ENST00000526843 742 ntBASIC6.03□□□□□ -1.44
TPM1P09493 OR4A41P-201ENST00000533053 928 ntBASIC6.03□□□□□ -1.44
TPM1P09493 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 MIR4502-201ENST00000580432 81 ntBASIC6.03□□□□□ -1.44
TPM1P09493 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TPM1P09493 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.03□□□□□ -1.44
TPM1P09493 MIR6721-201ENST00000617181 87 ntBASIC6.03□□□□□ -1.44
TPM1P09493 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 AC100757.1-201ENST00000616872 1835 ntBASIC6.03□□□□□ -1.44
TPM1P09493 AP005432.1-201ENST00000580891 3485 ntBASIC6.03□□□□□ -1.44
TPM1P09493 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TPM1P09493 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TPM1P09493 TRIM51GP-201ENST00000534741 1350 ntBASIC6.03□□□□□ -1.44
TPM1P09493 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TPM1P09493 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TPM1P09493 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM1P09493 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.02□□□□□ -1.45
TPM1P09493 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM1P09493 RN7SKP184-201ENST00000362348 333 ntBASIC6.02□□□□□ -1.45
TPM1P09493 RPL21P67-201ENST00000402896 478 ntBASIC6.02□□□□□ -1.45
TPM1P09493 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 AL354890.1-201ENST00000413730 346 ntBASIC6.02□□□□□ -1.45
TPM1P09493 RPSAP35-201ENST00000413753 818 ntBASIC6.02□□□□□ -1.45
TPM1P09493 NENFP1-201ENST00000419476 466 ntBASIC6.02□□□□□ -1.45
TPM1P09493 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TPM1P09493 BX119321.1-201ENST00000428912 797 ntBASIC6.02□□□□□ -1.45
TPM1P09493 AL022331.1-201ENST00000429025 477 ntBASIC6.02□□□□□ -1.45
TPM1P09493 HSPD1P12-201ENST00000429127 1069 ntBASIC6.02□□□□□ -1.45
TPM1P09493 AC090018.1-201ENST00000434369 367 ntBASIC6.02□□□□□ -1.45
TPM1P09493 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.02□□□□□ -1.45
TPM1P09493 CEACAMP11-201ENST00000455211 583 ntBASIC6.02□□□□□ -1.45
TPM1P09493 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.02□□□□□ -1.45
TPM1P09493 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TPM1P09493 AC022215.1-201ENST00000481770 362 ntBASIC6.02□□□□□ -1.45
TPM1P09493 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.02□□□□□ -1.45
TPM1P09493 RN7SL193P-201ENST00000491708 276 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms