Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 SCARNA18.1-201ENST00000516330 83 ntBASIC4.56□□□□□ -1.68
CTSDP07339 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.56□□□□□ -1.68
CTSDP07339 OR8A2P-201ENST00000528631 952 ntBASIC4.56□□□□□ -1.68
CTSDP07339 HMGN2P36-201ENST00000529541 409 ntBASIC4.56□□□□□ -1.68
CTSDP07339 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 PCNAP4-201ENST00000532690 730 ntBASIC4.56□□□□□ -1.68
CTSDP07339 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.56□□□□□ -1.68
CTSDP07339 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 AC006349.1-201ENST00000555526 235 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC092266.1-201ENST00000610958 165 ntBASIC4.56□□□□□ -1.68
CTSDP07339 AC022919.1-201ENST00000624979 626 ntBASIC4.56□□□□□ -1.68
CTSDP07339 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTSDP07339 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTSDP07339 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.56□□□□□ -1.68
CTSDP07339 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTSDP07339 AL034549.2-201ENST00000618285 3373 ntBASIC4.56□□□□□ -1.68
CTSDP07339 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTSDP07339 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 AC093225.1-201ENST00000506867 1408 ntBASIC4.55□□□□□ -1.68
CTSDP07339 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTSDP07339 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AC104260.2-201ENST00000623551 3497 ntBASIC4.55□□□□□ -1.68
CTSDP07339 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 AC017079.1-201ENST00000333650 415 ntBASIC4.55□□□□□ -1.68
CTSDP07339 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 RN7SKP187-201ENST00000365536 330 ntBASIC4.55□□□□□ -1.68
CTSDP07339 SNORA51.9-201ENST00000384295 124 ntBASIC4.55□□□□□ -1.68
CTSDP07339 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTSDP07339 AC099535.1-201ENST00000408928 371 ntBASIC4.55□□□□□ -1.68
CTSDP07339 CTSL3P-202ENST00000412179 788 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AC090018.1-201ENST00000434369 367 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.55□□□□□ -1.68
CTSDP07339 AMYP1-201ENST00000440059 1023 ntBASIC4.55□□□□□ -1.68
CTSDP07339 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 AC068491.1-201ENST00000449539 1241 ntBASIC4.55□□□□□ -1.68
CTSDP07339 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 CTSLP6-201ENST00000458273 1002 ntBASIC4.55□□□□□ -1.68
CTSDP07339 RPS4XP12-201ENST00000461747 709 ntBASIC4.55□□□□□ -1.68
CTSDP07339 RPS17P15-201ENST00000475609 349 ntBASIC4.55□□□□□ -1.68
CTSDP07339 RN7SL583P-201ENST00000475692 287 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.55□□□□□ -1.68
CTSDP07339 AC100784.1-201ENST00000522790 310 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.55□□□□□ -1.68
CTSDP07339 AP003396.4-201ENST00000527574 265 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.55□□□□□ -1.68
CTSDP07339 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 AC026826.3-201ENST00000561747 158 ntBASIC4.55□□□□□ -1.68
CTSDP07339 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.55□□□□□ -1.68
CTSDP07339 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.55□□□□□ -1.68
CTSDP07339 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.55□□□□□ -1.68
CTSDP07339 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AC103703.1-201ENST00000634783 663 ntBASIC4.55□□□□□ -1.68
CTSDP07339 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CTSDP07339 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CTSDP07339 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.55□□□□□ -1.68
CTSDP07339 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTSDP07339 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTSDP07339 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CTSDP07339 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.54□□□□□ -1.68
CTSDP07339 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms