Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
APOEP02649 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 RN7SKP185-201ENST00000362813 326 ntBASIC5.84□□□□□ -1.47
APOEP02649 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
APOEP02649 OR6E1P-201ENST00000414424 923 ntBASIC5.84□□□□□ -1.47
APOEP02649 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.84□□□□□ -1.47
APOEP02649 RNF10P1-201ENST00000418589 369 ntBASIC5.84□□□□□ -1.47
APOEP02649 GNG5P5-201ENST00000420444 220 ntBASIC5.84□□□□□ -1.47
APOEP02649 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.84□□□□□ -1.47
APOEP02649 AL133173.1-201ENST00000423458 397 ntBASIC5.84□□□□□ -1.47
APOEP02649 NAP1L4P2-201ENST00000425958 899 ntBASIC5.84□□□□□ -1.47
APOEP02649 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.84□□□□□ -1.47
APOEP02649 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.84□□□□□ -1.47
APOEP02649 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 AP000281.1-201ENST00000444036 316 ntBASIC5.84□□□□□ -1.47
APOEP02649 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.84□□□□□ -1.47
APOEP02649 LDHBP2-201ENST00000456969 1005 ntBASIC5.84□□□□□ -1.47
APOEP02649 AC023141.9-201ENST00000458734 412 ntBASIC5.84□□□□□ -1.47
APOEP02649 RPSAP39-201ENST00000467439 883 ntBASIC5.84□□□□□ -1.47
APOEP02649 AC074087.1-201ENST00000512059 724 ntBASIC5.84□□□□□ -1.47
APOEP02649 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.84□□□□□ -1.47
APOEP02649 MRPS21P7-201ENST00000566937 238 ntBASIC5.84□□□□□ -1.47
APOEP02649 AC020978.7-201ENST00000575953 1187 ntBASIC5.84□□□□□ -1.47
APOEP02649 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.84□□□□□ -1.47
APOEP02649 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.84□□□□□ -1.47
APOEP02649 AC018809.2-201ENST00000602436 3823 ntBASIC5.84□□□□□ -1.47
APOEP02649 AC004477.3-201ENST00000614061 590 ntBASIC5.84□□□□□ -1.47
APOEP02649 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.84□□□□□ -1.47
APOEP02649 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
APOEP02649 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
APOEP02649 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
APOEP02649 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
APOEP02649 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
APOEP02649 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
APOEP02649 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.84□□□□□ -1.48
APOEP02649 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 HSPA8P14-201ENST00000552265 1805 ntBASIC5.83□□□□□ -1.48
APOEP02649 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.83□□□□□ -1.48
APOEP02649 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 AL603750.1-201ENST00000624216 1717 ntBASIC5.83□□□□□ -1.48
APOEP02649 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 LINC01963-201ENST00000562038 3148 ntBASIC5.83□□□□□ -1.48
APOEP02649 RNA5SP242-201ENST00000364171 118 ntBASIC5.83□□□□□ -1.48
APOEP02649 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
APOEP02649 AC092642.1-201ENST00000392417 425 ntBASIC5.83□□□□□ -1.48
APOEP02649 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.83□□□□□ -1.48
APOEP02649 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 AC073909.1-201ENST00000447112 999 ntBASIC5.83□□□□□ -1.48
APOEP02649 AP000547.1-201ENST00000454360 617 ntBASIC5.83□□□□□ -1.48
APOEP02649 DEFB109A-201ENST00000482450 265 ntBASIC5.83□□□□□ -1.48
APOEP02649 ATP5LP5-201ENST00000483050 299 ntBASIC5.83□□□□□ -1.48
APOEP02649 MORF4L2P1-201ENST00000503761 858 ntBASIC5.83□□□□□ -1.48
APOEP02649 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.83□□□□□ -1.48
APOEP02649 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 AC106872.4-201ENST00000510050 523 ntBASIC5.83□□□□□ -1.48
APOEP02649 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 IGLV3-24-201ENST00000517477 197 ntBASIC5.83□□□□□ -1.48
APOEP02649 FTH1P11-201ENST00000517577 551 ntBASIC5.83□□□□□ -1.48
APOEP02649 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.83□□□□□ -1.48
APOEP02649 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.83□□□□□ -1.48
APOEP02649 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.83□□□□□ -1.48
APOEP02649 DHFRP1-201ENST00000579682 559 ntBASIC5.83□□□□□ -1.48
APOEP02649 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.83□□□□□ -1.48
APOEP02649 AC104695.2-201ENST00000605056 775 ntBASIC5.83□□□□□ -1.48
APOEP02649 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.83□□□□□ -1.48
APOEP02649 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
APOEP02649 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.83□□□□□ -1.48
APOEP02649 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
APOEP02649 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
APOEP02649 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms