Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC006530.1-201ENST00000555980 571 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 RPA2P1-201ENST00000556557 721 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC139792.1-201ENST00000607051 647 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC244107.2-201ENST00000611773 76 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC245014.3-201ENST00000618589 347 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AC079298.1-201ENST00000625026 1619 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQB1P01920 MT-RNR2-201ENST00000387347 1559 ntBASIC4.7□□□□□ -1.66
HLA-DQB1P01920 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AL354854.1-201ENST00000455940 1363 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 MIR130B-202ENST00000385018 82 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RBBP4P5-201ENST00000398583 1266 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 FAM183DP-201ENST00000421987 399 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RPS19P6-201ENST00000441327 433 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RPL6P30-201ENST00000443382 862 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RN7SL57P-201ENST00000493687 290 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RN7SL447P-201ENST00000494711 245 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RN7SL591P-201ENST00000496150 292 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC106822.1-201ENST00000502647 526 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC112484.3-201ENST00000505910 329 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 RNA5SP303-201ENST00000516192 130 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 WBP1LP3-201ENST00000523033 208 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 GTF2IP11-201ENST00000526931 420 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 MIR4776-2-201ENST00000580204 80 ntBASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB1P01920 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms