Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORA70-201ENST00000384436 135 ntBASIC5.35□□□□□ -1.55
TNFP01375 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TNFP01375 RNA5SP339-201ENST00000390987 122 ntBASIC5.35□□□□□ -1.55
TNFP01375 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.35□□□□□ -1.55
TNFP01375 RPSAP35-201ENST00000413753 818 ntBASIC5.35□□□□□ -1.55
TNFP01375 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFP01375 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 RPL7P56-201ENST00000429441 717 ntBASIC5.35□□□□□ -1.55
TNFP01375 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFP01375 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 PSAT1P4-201ENST00000466500 526 ntBASIC5.35□□□□□ -1.55
TNFP01375 RN7SL188P-201ENST00000469842 285 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFP01375 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TNFP01375 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 OR4A6P-201ENST00000534364 970 ntBASIC5.35□□□□□ -1.55
TNFP01375 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFP01375 AC084824.2-201ENST00000548906 345 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC044860.2-201ENST00000561005 179 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC005341.1-201ENST00000571086 708 ntBASIC5.35□□□□□ -1.55
TNFP01375 RBM22P1-201ENST00000578589 1214 ntBASIC5.35□□□□□ -1.55
TNFP01375 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFP01375 AL353729.2-201ENST00000605859 1249 ntBASIC5.35□□□□□ -1.55
TNFP01375 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFP01375 AL021707.7-201ENST00000607991 416 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC037198.3-201ENST00000616754 526 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC005899.7-201ENST00000618199 588 ntBASIC5.35□□□□□ -1.55
TNFP01375 AC018445.2-201ENST00000622987 260 ntBASIC5.35□□□□□ -1.55
TNFP01375 AP002505.2-201ENST00000623585 696 ntBASIC5.35□□□□□ -1.55
TNFP01375 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFP01375 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFP01375 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFP01375 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TNFP01375 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TNFP01375 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNFP01375 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 AC018765.1-201ENST00000623357 3446 ntBASIC5.34□□□□□ -1.55
TNFP01375 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
TNFP01375 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TNFP01375 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFP01375 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNFP01375 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFP01375 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
TNFP01375 H3F3BP1-201ENST00000440551 403 ntBASIC5.34□□□□□ -1.55
TNFP01375 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 EEF1B2P5-201ENST00000444820 548 ntBASIC5.34□□□□□ -1.55
TNFP01375 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.34□□□□□ -1.55
TNFP01375 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 AC005532.2-201ENST00000467154 373 ntBASIC5.34□□□□□ -1.55
TNFP01375 RN7SL727P-201ENST00000482164 296 ntBASIC5.34□□□□□ -1.55
TNFP01375 RPL15P21-201ENST00000495592 567 ntBASIC5.34□□□□□ -1.55
TNFP01375 AC147055.3-201ENST00000510547 851 ntBASIC5.34□□□□□ -1.55
TNFP01375 AC109464.1-201ENST00000511091 819 ntBASIC5.34□□□□□ -1.55
TNFP01375 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.34□□□□□ -1.55
TNFP01375 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNFP01375 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
TNFP01375 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.34□□□□□ -1.55
TNFP01375 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
TNFP01375 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 AC126915.2-201ENST00000610957 190 ntBASIC5.34□□□□□ -1.55
TNFP01375 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
TNFP01375 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.34□□□□□ -1.55
TNFP01375 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.34□□□□□ -1.55
TNFP01375 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TNFP01375 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.33□□□□□ -1.56
TNFP01375 AL359955.1-201ENST00000455242 3275 ntBASIC5.33□□□□□ -1.56
TNFP01375 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 AC006600.2-201ENST00000624834 2506 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.33□□□□□ -1.56
TNFP01375 KYNUP3-201ENST00000574386 1341 ntBASIC5.33□□□□□ -1.56
TNFP01375 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNFP01375 RNU1-149P-201ENST00000390870 161 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.33□□□□□ -1.56
TNFP01375 RNA5SP487-201ENST00000410186 122 ntBASIC5.33□□□□□ -1.56
TNFP01375 DPPA2P3-201ENST00000411853 655 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC093655.2-201ENST00000425735 631 ntBASIC5.33□□□□□ -1.56
TNFP01375 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.33□□□□□ -1.56
TNFP01375 AC245047.2-201ENST00000441060 530 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms