Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
SSX4O60224 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 AC097063.1-201ENST00000426714 1797 ntBASIC5.32□□□□□ -1.56
SSX4O60224 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX4O60224 LINC02019-201ENST00000608605 2060 ntBASIC5.32□□□□□ -1.56
SSX4O60224 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SSX4O60224 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 AC245100.2-201ENST00000454544 1679 ntBASIC5.31□□□□□ -1.56
SSX4O60224 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX4O60224 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 SUGT1P2-201ENST00000379452 992 ntBASIC5.31□□□□□ -1.56
SSX4O60224 SLC20A1P1-201ENST00000413906 956 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC079809.1-201ENST00000415468 276 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX4O60224 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 AL391987.1-201ENST00000441025 200 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 HIGD1AP16-201ENST00000450986 258 ntBASIC5.31□□□□□ -1.56
SSX4O60224 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 MTATP6P1-201ENST00000514057 681 ntBASIC5.31□□□□□ -1.56
SSX4O60224 OR5H7P-201ENST00000514084 930 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC111000.6-201ENST00000514471 709 ntBASIC5.31□□□□□ -1.56
SSX4O60224 RNU6-467P-201ENST00000517027 110 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 AL359219.2-201ENST00000555184 348 ntBASIC5.31□□□□□ -1.56
SSX4O60224 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX4O60224 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX4O60224 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX4O60224 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AP001823.1-201ENST00000604056 1003 ntBASIC5.31□□□□□ -1.56
SSX4O60224 BX323046.1-201ENST00000610145 535 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AL512652.1-201ENST00000619006 500 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 AC079298.2-201ENST00000623885 459 ntBASIC5.31□□□□□ -1.56
SSX4O60224 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX4O60224 AC018717.1-201ENST00000457712 1505 ntBASIC5.31□□□□□ -1.56
SSX4O60224 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX4O60224 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 KARSP1-201ENST00000451871 1752 ntBASIC5.31□□□□□ -1.56
SSX4O60224 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX4O60224 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX4O60224 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX4O60224 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX4O60224 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.3□□□□□ -1.56
SSX4O60224 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX4O60224 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX4O60224 AC010132.2-201ENST00000295493 1043 ntBASIC5.3□□□□□ -1.56
SSX4O60224 RNA5SP110-201ENST00000362638 115 ntBASIC5.3□□□□□ -1.56
SSX4O60224 RNU1-134P-201ENST00000362935 165 ntBASIC5.3□□□□□ -1.56
SSX4O60224 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX4O60224 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX4O60224 RNU6-40P-201ENST00000384254 107 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC130360.1-201ENST00000425489 1117 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC023141.3-201ENST00000436698 278 ntBASIC5.3□□□□□ -1.56
SSX4O60224 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.3□□□□□ -1.56
SSX4O60224 AC073109.1-201ENST00000445066 978 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms