Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA3O43365 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXA3O43365 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXA3O43365 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXA3O43365 AP001000.1-201ENST00000526843 742 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC024405.1-201ENST00000532521 1042 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC092851.1-201ENST00000535964 478 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA3O43365 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXA3O43365 NXPE2P1-201ENST00000543705 726 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXA3O43365 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA3O43365 AC068305.2-201ENST00000550567 1205 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA3O43365 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXA3O43365 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXA3O43365 MIR3157-201ENST00000578688 85 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA3O43365 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXA3O43365 VN1R88P-201ENST00000596787 292 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC011500.1-201ENST00000601963 469 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC125494.3-201ENST00000602759 455 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 BUB1P1-201ENST00000603541 607 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC007255.2-201ENST00000604053 631 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC100767.2-201ENST00000604840 693 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AP005329.3-201ENST00000609924 686 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC007204.2-201ENST00000615022 616 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC099842.1-201ENST00000619919 596 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 AC068213.1-201ENST00000625124 226 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA3O43365 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXA3O43365 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 AC005839.1-201ENST00000624148 3213 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 AC129502.1-201ENST00000623261 1654 ntBASIC5.53□□□□□ -1.52
HOXA3O43365 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
HOXA3O43365 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXA3O43365 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXA3O43365 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 AL033543.1-201ENST00000623440 13454 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 MTND5P24-201ENST00000438892 1767 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 ZNF833P-201ENST00000424938 1494 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 AC217777.1-201ENST00000570034 1471 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 AL391994.1-201ENST00000254724 282 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA3O43365 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA3O43365 IL6STP1-201ENST00000346911 1020 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 RN7SKP250-201ENST00000363924 321 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 SNORA64.3-201ENST00000365647 134 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA3O43365 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA3O43365 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXA3O43365 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA3O43365 TCEA1P4-201ENST00000415066 844 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 RAD23BP2-201ENST00000416003 1207 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 AC012519.1-201ENST00000424588 610 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXA3O43365 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA3O43365 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 GTF2IP7-202ENST00000436677 309 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 AL353093.1-201ENST00000441292 436 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 MTND1P1-201ENST00000445453 368 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA3O43365 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA3O43365 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA3O43365 RN7SL168P-201ENST00000463821 279 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 RPL7P18-201ENST00000478965 734 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXA3O43365 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXA3O43365 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA3O43365 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXA3O43365 CR383658.1-201ENST00000514609 734 ntBASIC5.52□□□□□ -1.53
HOXA3O43365 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXA3O43365 RN7SKP196-201ENST00000516267 345 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms