Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK2O00526 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPK2O00526 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UPK2O00526 Z83820.1-201ENST00000456978 1499 ntBASIC4.41□□□□□ -1.7
UPK2O00526 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
UPK2O00526 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK2O00526 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UPK2O00526 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
UPK2O00526 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.41□□□□□ -1.7
UPK2O00526 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UPK2O00526 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
UPK2O00526 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UPK2O00526 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
UPK2O00526 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UPK2O00526 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UPK2O00526 AC002525.1-201ENST00000624392 1622 ntBASIC4.4□□□□□ -1.7
UPK2O00526 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.4□□□□□ -1.7
UPK2O00526 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 RNA5SP187-201ENST00000384400 119 ntBASIC4.4□□□□□ -1.71
UPK2O00526 HMGB1P20-201ENST00000402555 677 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AL589994.1-201ENST00000404962 340 ntBASIC4.4□□□□□ -1.71
UPK2O00526 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.4□□□□□ -1.71
UPK2O00526 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 AC113412.1-201ENST00000425840 504 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC017019.1-201ENST00000426129 261 ntBASIC4.4□□□□□ -1.71
UPK2O00526 RPL7AP49-201ENST00000429522 581 ntBASIC4.4□□□□□ -1.71
UPK2O00526 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 AL591438.1-201ENST00000433508 581 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 RPL5P25-201ENST00000441148 775 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC016772.1-201ENST00000444170 1261 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC005297.1-201ENST00000444765 862 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AL450996.1-201ENST00000445574 1202 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AP000547.1-201ENST00000454360 617 ntBASIC4.4□□□□□ -1.71
UPK2O00526 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 AP002884.1-201ENST00000479691 655 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC091544.1-201ENST00000484702 348 ntBASIC4.4□□□□□ -1.71
UPK2O00526 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 IGBP1P4-201ENST00000503202 879 ntBASIC4.4□□□□□ -1.71
UPK2O00526 HMGN1P9-201ENST00000515212 298 ntBASIC4.4□□□□□ -1.71
UPK2O00526 SCARNA20.4-201ENST00000516969 131 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK2O00526 TRIM77BP-201ENST00000524985 1119 ntBASIC4.4□□□□□ -1.71
UPK2O00526 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 MTND2P17-201ENST00000550281 688 ntBASIC4.4□□□□□ -1.71
UPK2O00526 IGBP1P1-201ENST00000554337 1009 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 RN7SL290P-201ENST00000578661 300 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AP005403.1-201ENST00000579720 229 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC108738.1-201ENST00000603703 237 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK2O00526 MIR7109-201ENST00000613748 65 ntBASIC4.4□□□□□ -1.71
UPK2O00526 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.4□□□□□ -1.71
UPK2O00526 AC048341.3-201ENST00000619323 491 ntBASIC4.4□□□□□ -1.71
UPK2O00526 FO681491.1-202ENST00000623392 737 ntBASIC4.4□□□□□ -1.71
UPK2O00526 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
UPK2O00526 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
UPK2O00526 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
UPK2O00526 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPK2O00526 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
UPK2O00526 AL078621.3-201ENST00000623707 2042 ntBASIC4.39□□□□□ -1.71
UPK2O00526 SRRM1P3-201ENST00000426911 2678 ntBASIC4.39□□□□□ -1.71
UPK2O00526 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK2O00526 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
UPK2O00526 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
UPK2O00526 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.39□□□□□ -1.71
UPK2O00526 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
UPK2O00526 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.39□□□□□ -1.71
UPK2O00526 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK2O00526 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 OR56A4-201ENST00000330728 1209 ntBASIC4.39□□□□□ -1.71
UPK2O00526 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 RNA5SP394-201ENST00000364216 119 ntBASIC4.39□□□□□ -1.71
UPK2O00526 RNA5SP433-201ENST00000364491 114 ntBASIC4.39□□□□□ -1.71
UPK2O00526 RN7SKP6-201ENST00000364795 319 ntBASIC4.39□□□□□ -1.71
UPK2O00526 SNORA48.4-201ENST00000391089 134 ntBASIC4.39□□□□□ -1.71
UPK2O00526 GAPDHP42-201ENST00000406848 981 ntBASIC4.39□□□□□ -1.71
UPK2O00526 SMC4P1-201ENST00000414479 527 ntBASIC4.39□□□□□ -1.71
UPK2O00526 HYALP1-201ENST00000417674 1279 ntBASIC4.39□□□□□ -1.71
UPK2O00526 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK2O00526 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK2O00526 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK2O00526 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
UPK2O00526 LRRC37A14P-201ENST00000452297 462 ntBASIC4.39□□□□□ -1.71
UPK2O00526 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms