Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 AL035405.1-201ENST00000400795 710 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AL354890.1-201ENST00000413730 346 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
FOXN3O00409 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.31□□□□□ -1.4
FOXN3O00409 RNFT1P2-201ENST00000443064 757 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 RPL23AP23-201ENST00000452590 471 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 FRG2FP-204ENST00000453982 852 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 LDHBP2-201ENST00000456969 1005 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AC098847.1-201ENST00000473094 348 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 RBBP4P1-201ENST00000502424 1276 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 UGT2A3P7-201ENST00000510485 734 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 MTATP6P9-201ENST00000515039 680 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AC112198.4-201ENST00000515450 351 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 RN7SKP238-201ENST00000516483 249 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 OR4A17P-201ENST00000526032 904 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AC084121.1-201ENST00000533882 835 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AL512310.9-201ENST00000553311 948 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 AC090826.1-203ENST00000569235 490 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
FOXN3O00409 AC005244.1-201ENST00000582566 339 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXN3O00409 AC022960.3-201ENST00000619794 441 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXN3O00409 FRG1DP-201ENST00000635586 771 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
FOXN3O00409 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXN3O00409 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.31□□□□□ -1.4
FOXN3O00409 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXN3O00409 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXN3O00409 QRSL1P1-201ENST00000400977 1540 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 AC092070.2-203ENST00000598377 3644 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
FOXN3O00409 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXN3O00409 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXN3O00409 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
FOXN3O00409 ELOCP6-201ENST00000429066 328 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC096775.1-201ENST00000437724 448 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 ATP5LP2-201ENST00000440646 311 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXN3O00409 RPL6P30-201ENST00000443382 862 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC093166.3-201ENST00000448785 303 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 GEMIN2P1-201ENST00000454246 752 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 ELOCP12-201ENST00000458706 328 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC005165.2-201ENST00000466070 380 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC116562.1-201ENST00000485355 781 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 SUMO1P1-201ENST00000497904 306 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 IGKV2-4-201ENST00000523070 340 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXN3O00409 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXN3O00409 GLRXP2-201ENST00000555594 321 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXN3O00409 AC126365.2-201ENST00000580630 379 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.3□□□□□ -1.4
FOXN3O00409 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXN3O00409 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 AC073137.1-201ENST00000605636 634 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC026741.1-201ENST00000605892 482 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 AP001437.1-201ENST00000608783 456 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AL138960.1-201ENST00000613838 513 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 MIR8084-201ENST00000614105 89 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC015660.5-201ENST00000623238 564 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC092159.4-201ENST00000624944 550 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXN3O00409 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.3□□□□□ -1.4
FOXN3O00409 OR11H2-202ENST00000641517 1085 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC011933.2-201ENST00000578539 2790 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 AC093225.1-201ENST00000506867 1408 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 AL359715.4-201ENST00000606629 1436 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXN3O00409 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXN3O00409 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXN3O00409 MFSD8-239ENST00000641590 2479 ntBASIC6.3□□□□□ -1.4
FOXN3O00409 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXN3O00409 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 MFSD8-219ENST00000641228 2559 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms