Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 AL022393.1-201ENST00000625142 1677 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC013268.2-201ENST00000420753 337 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AL389925.1-201ENST00000432257 728 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AL359265.1-201ENST00000440296 795 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AC002553.2-201ENST00000453217 340 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AP002884.1-201ENST00000479691 655 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 NIP7P2-201ENST00000485801 544 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC098976.1-201ENST00000513014 541 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC024940.3-201ENST00000538551 316 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AP005901.4-201ENST00000577336 569 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM1O00151 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC068768.2-201ENST00000602352 343 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 AL353600.1-201ENST00000608148 251 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM1O00151 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AL445670.1-201ENST00000618889 801 ntBASIC5.41□□□□□ -1.54
PDLIM1O00151 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.41□□□□□ -1.54
PDLIM1O00151 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM1O00151 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM1O00151 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM1O00151 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 IFIT1P1-201ENST00000400497 1449 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 OR56A4-201ENST00000330728 1209 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM1O00151 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 RNA5SP156-201ENST00000410250 110 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM1O00151 OR10T1P-201ENST00000424327 947 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 NFYAP1-201ENST00000431953 972 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM1O00151 GTF3AP5-201ENST00000442645 697 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC009963.3-201ENST00000458090 486 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM1O00151 LDHAP1-201ENST00000509421 992 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM1O00151 PRMT5P1-201ENST00000514351 598 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 RNA5SP360-201ENST00000516555 118 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AP000859.1-201ENST00000525536 307 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC022882.1-201ENST00000532142 501 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AC007346.1-201ENST00000569208 867 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM1O00151 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM1O00151 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM1O00151 AC233280.2-201ENST00000603917 1070 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC091167.5-201ENST00000605689 894 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 AC092266.1-201ENST00000610958 165 ntBASIC5.4□□□□□ -1.54
PDLIM1O00151 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM1O00151 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM1O00151 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PDLIM1O00151 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PDLIM1O00151 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM1O00151 AL354854.1-201ENST00000455940 1363 ntBASIC5.4□□□□□ -1.55
PDLIM1O00151 MTCO1P22-201ENST00000604619 1360 ntBASIC5.4□□□□□ -1.55
PDLIM1O00151 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM1O00151 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM1O00151 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms