Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC188H7C350 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 CASC19-238ENST00000641523 1558 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 OR1L6-202ENST00000373684 1044 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 MIR551B-201ENST00000384984 96 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 COX5BP7-201ENST00000414780 274 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC244453.4-201ENST00000419150 388 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC126120.1-201ENST00000431082 470 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 RPL19P16-201ENST00000433839 588 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 GAPDHP59-201ENST00000435908 267 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 RPL6P30-201ENST00000443382 862 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC188H7C350 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC188H7C350 GAPDHP14-201ENST00000450472 937 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 PRPF38AP1-201ENST00000451976 933 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 GUSBP9-201ENST00000510138 584 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 IGKV3D-25-201ENST00000519599 235 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 IGLV3-30-201ENST00000524362 298 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AP001804.2-201ENST00000533932 910 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 AL121839.1-201ENST00000556233 1185 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 HMGN2P47-201ENST00000559378 272 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC127024.5-201ENST00000580085 462 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC188H7C350 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC092266.1-201ENST00000610958 165 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 uc_338.31-201ENST00000615595 186 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC188H7C350 AC011503.2-201ENST00000594230 1500 ntBASIC5.77□□□□□ -1.49
CCDC188H7C350 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC188H7C350 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC188H7C350 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 CAP1P2-201ENST00000417455 1409 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC007842.1-201ENST00000597336 2039 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC188H7C350 RPS20P25-201ENST00000412447 352 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 RPSAP35-201ENST00000413753 818 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 AK4P4-201ENST00000419465 646 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 YY1P1-201ENST00000427625 668 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 COX6B1P2-201ENST00000489624 230 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 IGBP1P4-201ENST00000503202 879 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 ATG10-AS1-201ENST00000504846 648 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 AC092349.1-201ENST00000504903 310 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 IMPA1P1-201ENST00000510718 842 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 SNORA48.9-201ENST00000516419 162 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC188H7C350 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC188H7C350 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC009852.2-201ENST00000567898 485 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC188H7C350 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 AC063977.5-201ENST00000601044 974 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 AC067838.1-201ENST00000606064 577 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.76□□□□□ -1.49
CCDC188H7C350 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC188H7C350 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC188H7C350 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms