Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL359091.1-201ENST00000449048 1734 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 RNU5A-6P-201ENST00000384136 116 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 MIR614-201ENST00000385082 90 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC002524.1-201ENST00000411687 547 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CDY14P-201ENST00000431260 1014 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC069154.1-201ENST00000432914 542 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 LARP1BP3-201ENST00000437229 869 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 BX005266.3-201ENST00000443013 1075 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 VN1R10P-201ENST00000447106 875 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CDY23P-201ENST00000451661 1014 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 PCMTD1P3-201ENST00000451824 472 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL606490.1-201ENST00000452266 765 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 RN7SL414P-201ENST00000469545 294 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC079841.1-201ENST00000481228 950 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC041039.1-201ENST00000485656 536 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 RPL7L1P4-201ENST00000513004 707 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC144548.1-201ENST00000549577 324 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 PCMTD1P2-201ENST00000565017 355 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC096708.2-201ENST00000577676 512 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 SNRPCP20-201ENST00000588011 210 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 APOC2-204ENST00000591597 447 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC012065.4-201ENST00000602445 679 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC015871.2-201ENST00000603605 948 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL021918.1-201ENST00000603933 236 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC006566.1-201ENST00000608943 513 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 TUG1_1.1-201ENST00000610654 145 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC011472.4-201ENST00000615848 491 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 MIR6761-201ENST00000617899 72 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC239600.2-201ENST00000619615 1165 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CR381653.2-201ENST00000624041 768 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL353608.4-201ENST00000624487 1188 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 OLMALINC-203ENST00000641087 3779 ntBASIC6.19□□□□□ -1.42
SHISA3A0PJX4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHISA3A0PJX4 AC010132.4-201ENST00000569883 1368 ntBASIC6.18□□□□□ -1.42
SHISA3A0PJX4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.18□□□□□ -1.42
SHISA3A0PJX4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms