Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 PWAR1-201ENST00000624188 2414 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC089998.1-201ENST00000548575 3141 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 VN1R12P-201ENST00000403778 876 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 RNU2-18P-201ENST00000411224 162 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 HMGB3P24-201ENST00000433260 622 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 ELOCP3-201ENST00000439303 348 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 NANOGP9-201ENST00000439890 892 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 MRE11P1-201ENST00000464884 2127 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 UBFD1P1-201ENST00000473259 814 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC022215.1-201ENST00000481770 362 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 RNU6-1102P-201ENST00000516149 96 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 CIR1P1-201ENST00000524055 1133 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 OR8Q1P-201ENST00000526467 655 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC084824.2-201ENST00000548906 345 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 ZNF92P2-201ENST00000600543 1059 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC018809.2-201ENST00000602436 3823 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC112220.2-201ENST00000605513 533 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AC068787.1-201ENST00000623908 691 ntBASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV5S1A1TA0A578 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC068870.1-201ENST00000563737 2455 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 TTC41P-205ENST00000551270 3963 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OR13C1P-202ENST00000641378 2919 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OR52B3P-201ENST00000314715 928 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 RNA5SP394-201ENST00000364216 119 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 MTND4LP21-201ENST00000415303 295 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AL158827.1-201ENST00000416300 391 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 MARK2P12-201ENST00000420129 585 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 RPL12P43-201ENST00000420608 499 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC007000.2-201ENST00000442564 487 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC068587.2-201ENST00000478386 781 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 RPL23AP73-201ENST00000492507 471 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 OR2A3P-201ENST00000493774 953 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 SNORA70.20-201ENST00000516848 126 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 YWHAZP1-201ENST00000556286 722 ntBASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV5S1A1TA0A578 MIR4311-201ENST00000580794 100 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms