Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 QRSL1P1-201ENST00000400977 1540 ntBASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA6Q9Y5G7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 IFIT1P1-201ENST00000400497 1449 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 MFSD8-220ENST00000641243 1422 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP433-201ENST00000364491 114 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RNU6-532P-201ENST00000384318 107 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 MIR137-201ENST00000385223 102 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL021331.1-201ENST00000402817 582 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RPL21P50-201ENST00000417698 477 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 DPY19L1P2-201ENST00000426647 915 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC092634.2-201ENST00000428146 1010 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC007679.3-201ENST00000434035 414 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 CR769776.1-201ENST00000441254 787 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL161722.1-201ENST00000446972 1032 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 ZNF886P-201ENST00000450781 723 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL157777.1-201ENST00000468100 304 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC092824.1-201ENST00000483524 576 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP441-201ENST00000516809 88 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC095057.3-201ENST00000567102 1157 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 ATP5F1P7-201ENST00000567330 760 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC007346.1-201ENST00000569208 867 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC005377.1-201ENST00000605126 456 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC004836.1-201ENST00000623032 634 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC015660.5-201ENST00000623238 564 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC007342.8-201ENST00000623278 678 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC145207.9-201ENST00000623802 325 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC011815.3-201ENST00000624194 473 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AP000577.1-201ENST00000624366 878 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AL357140.4-201ENST00000636827 412 ntBASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA6Q9Y5G7 HSPD1P9-201ENST00000420325 1636 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 AC073055.1-201ENST00000456901 1621 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 SNX18P3-202ENST00000565670 1750 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 FAM32BP-201ENST00000344033 333 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP188-201ENST00000362916 129 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 RNU4-28P-201ENST00000364739 141 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 RNA5SP251-201ENST00000410614 137 ntBASIC6.17□□□□□ -1.42
PCDHGA6Q9Y5G7 VTA1P1-201ENST00000414044 866 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms