Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RNA5SP514-201ENST00000363717 111 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RNU4-68P-201ENST00000364314 141 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 Y_RNA.505-201ENST00000384489 102 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RN7SKP121-201ENST00000410842 305 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RAB9AP4-201ENST00000415230 609 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RPS17P17-201ENST00000419392 409 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 VN1R20P-201ENST00000425215 966 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL160175.1-201ENST00000428124 247 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RPL6P30-201ENST00000443382 862 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL133351.3-201ENST00000454998 193 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC044810.1-201ENST00000480271 711 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 PPP1R11P1-201ENST00000486095 376 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RPL29P23-201ENST00000486188 442 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 RPS3AP22-201ENST00000488297 769 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 SNORA3.4-201ENST00000515969 96 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 SNORA81.2-201ENST00000516868 170 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AP001000.1-201ENST00000526843 742 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LRRC6P1-201ENST00000532188 885 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR4A40P-201ENST00000533878 948 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR4H6P-201ENST00000563771 921 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL133507.1-201ENST00000605269 557 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL021368.3-201ENST00000607119 578 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AC022079.2-201ENST00000619739 566 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 AL049536.1-201ENST00000625043 744 ntBASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB4Q9Y5E5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 ZNF90P1-201ENST00000480493 1951 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 NCOA4P2-201ENST00000340589 1813 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 MTHFD2P5-201ENST00000320415 844 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 RNU6-252P-201ENST00000363232 107 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 Y_RNA.436-201ENST00000384097 102 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 RNU6-636P-201ENST00000384598 107 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 FAM183DP-201ENST00000421987 399 ntBASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB4Q9Y5E5 AC094019.1-201ENST00000434678 472 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms