Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 HMGB3P24-201ENST00000433260 622 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 DUTP1-201ENST00000493631 470 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 RPS17P5-201ENST00000498293 408 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC021146.10-201ENST00000515628 706 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 HMGB1P42-201ENST00000532126 553 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC016839.1-201ENST00000578162 867 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC100767.2-201ENST00000604840 693 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC087565.3-203ENST00000641018 837 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 ADAM5-202ENST00000399789 1942 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 OR13C1P-202ENST00000641378 2919 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC099654.3-201ENST00000447087 1546 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 LINC01963-201ENST00000562038 3148 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC012078.1-201ENST00000405035 1646 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 AC025574.1-201ENST00000554784 1653 ntBASIC5.12□□□□□ -1.59
TRAPPC4Q9Y296 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 OR9K1P-201ENST00000326513 941 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 OR56A4-201ENST00000330728 1209 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 LYPLA1P3-201ENST00000402650 695 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 NACAP7-201ENST00000407371 609 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 MIR1282-201ENST00000408865 101 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 NPM1P40-201ENST00000412758 733 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 NENFP1-201ENST00000419476 466 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 RPL34P3-201ENST00000421454 338 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 NDUFB4P8-201ENST00000435351 367 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 OR52E3P-201ENST00000452083 936 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC087672.1-201ENST00000479876 766 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC139697.1-201ENST00000548429 745 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 DPPA2P4-201ENST00000563717 878 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 MIR4311-201ENST00000580794 100 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 BNIP3P41-202ENST00000616656 861 ntBASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRAPPC4Q9Y296 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
TRAPPC4Q9Y296 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms