Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 MIR137-201ENST00000385223 102 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 RNU2-22P-201ENST00000411266 212 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 RPS26P38-201ENST00000414476 348 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 RPA2P2-201ENST00000419698 796 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC006065.1-201ENST00000422539 802 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 PA2G4P6-201ENST00000438325 1197 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 SCAND3P1-201ENST00000439854 1060 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 REG1CP-206ENST00000447469 496 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 EIF2S2P5-201ENST00000457635 968 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC016550.1-201ENST00000505348 785 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 CYCSP22-201ENST00000517555 339 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 AL512310.9-201ENST00000553311 948 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC044860.2-201ENST00000561005 179 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 MIR4776-2-201ENST00000580204 80 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 DNAJC19P3-201ENST00000594491 331 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 SUMO2P15-201ENST00000604285 278 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC104695.2-201ENST00000605056 775 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AL008723.3-201ENST00000608926 449 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC016769.4-201ENST00000616893 535 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 MIR7159-201ENST00000620587 66 ntBASIC8.24□□□□□ -1.09
USP35Q9P2H5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
USP35Q9P2H5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.24□□□□□ -1.09
USP35Q9P2H5 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 RNU1-19P-201ENST00000363306 165 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 RNU11-201ENST00000387069 134 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 RPS3AP2-201ENST00000407190 754 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 RPS7P8-201ENST00000418311 581 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC093716.1-201ENST00000435923 377 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC015983.1-201ENST00000441577 373 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 RBMY2TP-201ENST00000451162 947 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AL139156.3-201ENST00000454802 394 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC092865.1-201ENST00000544395 1023 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AL390726.5-202ENST00000564800 256 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC010547.6-201ENST00000571789 193 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AL360012.1-201ENST00000602813 131 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC097467.4-201ENST00000605504 141 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 RPL12P48-201ENST00000605620 304 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC006924.1-201ENST00000610750 559 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC118658.2-201ENST00000618697 459 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC090617.9-201ENST00000623751 147 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 AC007382.1-201ENST00000624376 2618 ntBASIC8.23□□□□□ -1.09
USP35Q9P2H5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.23□□□□□ -1.09
USP35Q9P2H5 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USP35Q9P2H5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC092724.1-201ENST00000624623 3397 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AL360271.1-201ENST00000395679 510 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 ARAFP2-201ENST00000440565 559 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms