Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 OR4K12P-201ENST00000406538 961 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 GAPDHP42-201ENST00000406848 981 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 RNGTTP1-201ENST00000420965 728 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 CFL1P1-202ENST00000432948 411 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 NANOGP9-201ENST00000439890 892 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL451063.1-201ENST00000450164 1133 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 DUTP1-201ENST00000493631 470 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 DUTP7-201ENST00000507982 486 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AC110775.1-201ENST00000513721 462 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 MIR2117-201ENST00000516780 80 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AC003973.3-201ENST00000624863 2822 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 AL359715.3-201ENST00000569267 2123 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 NCOA4P2-201ENST00000340589 1813 ntBASIC5.27□□□□□ -1.57
CCDC88CQ9P219 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC88CQ9P219 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 RNU1-77P-201ENST00000390868 162 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 MIR1286-201ENST00000408112 78 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LINC02210-201ENST00000444561 288 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 RN7SL172P-201ENST00000460535 303 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC008953.1-201ENST00000497334 318 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 IGLV3-24-201ENST00000517477 197 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 DHFRP1-201ENST00000579682 559 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC119501.1-201ENST00000603646 475 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC068870.2-201ENST00000620635 389 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 SAMMSON-210ENST00000641260 1308 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AL450996.1-201ENST00000445574 1202 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC100832.1-201ENST00000471945 383 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 RN7SL727P-201ENST00000482164 296 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 TAS2R6P-201ENST00000605022 826 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AL031658.2-201ENST00000616850 651 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC004808.2-201ENST00000627965 773 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC88CQ9P219 AC137056.2-201ENST00000624055 1958 ntBASIC5.26□□□□□ -1.57
CCDC88CQ9P219 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms