Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC078878.1-201ENST00000539832 958 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC027216.1-201ENST00000577726 685 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 RN7SL356P-201ENST00000582228 248 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 MIR4505-201ENST00000582238 73 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 RNA5SP440-201ENST00000612665 119 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AL118556.2-201ENST00000614375 824 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AP003400.3-201ENST00000624904 346 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 MTCO1P8-201ENST00000416914 1523 ntBASIC5.82□□□□□ -1.48
SIX2Q9NPC8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIX2Q9NPC8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 RPL12P17-201ENST00000432393 498 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 HMGN1P36-201ENST00000446623 298 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC073909.1-201ENST00000447112 999 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AL451063.1-201ENST00000450164 1133 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 RANP1-206ENST00000455094 651 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 RNU6-551P-201ENST00000516661 103 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC000068.2-201ENST00000608816 460 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 MTCO1P1-201ENST00000624263 1081 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.81□□□□□ -1.48
SIX2Q9NPC8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX2Q9NPC8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 MIR133B-201ENST00000362210 119 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 RNA5SP510-201ENST00000364697 99 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 RNU4-2-201ENST00000365668 141 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 RPL19P16-201ENST00000433839 588 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC012075.1-201ENST00000436549 580 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 CYCSP51-201ENST00000443545 318 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 VN1R96P-201ENST00000446052 858 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 NOP56P2-201ENST00000447491 769 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AL672138.1-201ENST00000450604 1015 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 PPP1R11P1-201ENST00000486095 376 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 HMGB1P44-201ENST00000508597 572 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 SNORA48.9-201ENST00000516419 162 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms