Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR11H13P-201ENST00000359695 979 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 RNY4P24-201ENST00000362735 96 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 RNU6-761P-201ENST00000384148 107 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 ATP5G1P5-201ENST00000429024 411 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 UBE2V1P8-201ENST00000437166 265 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC098614.3-201ENST00000438957 440 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AL158214.1-201ENST00000444423 404 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC003071.1-201ENST00000451219 789 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 RN7SL143P-201ENST00000496780 297 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 BNIP3P41-201ENST00000503774 571 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 MYL12BP2-201ENST00000503948 512 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC083906.1-201ENST00000509298 406 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC093281.2-201ENST00000510153 597 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC006499.4-201ENST00000510947 694 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 KRT19P6-201ENST00000510983 209 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 PRELID3BP4-201ENST00000515476 571 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AP003392.2-201ENST00000527269 208 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC124293.1-201ENST00000530034 493 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR5M6P-201ENST00000530227 937 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR52K3P-201ENST00000531655 943 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC118273.2-201ENST00000532092 465 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR6C7P-201ENST00000547875 934 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 NPM1P47-201ENST00000560843 856 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 UBE2CP4-201ENST00000561405 535 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 RN7SL697P-201ENST00000582484 299 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 BNIP3P26-201ENST00000600827 554 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 RN7SL778P-201ENST00000607160 297 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC009283.1-201ENST00000615852 645 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AP005212.3-201ENST00000619964 528 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC092794.2-201ENST00000620933 563 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AP000577.1-201ENST00000624366 878 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 AC073488.7-201ENST00000633785 778 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 OR5AK4P-201ENST00000635912 903 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 CUBNP3-201ENST00000457461 1784 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 CDY19P-201ENST00000411668 1613 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 CDY18P-201ENST00000438294 1609 ntBASIC6.79□□□□□ -1.32
SSU72Q9NP77 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SSU72Q9NP77 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SSU72Q9NP77 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC068769.1-201ENST00000474767 2426 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AL591848.4-201ENST00000567832 3472 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 HMGB1P39-201ENST00000366304 880 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 SNORA70.9-201ENST00000384370 135 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 VN1R12P-201ENST00000403778 876 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AL359715.1-201ENST00000404330 555 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 RN7SKP148-201ENST00000410179 275 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 TCEA1P4-201ENST00000415066 844 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 CCDC58P2-201ENST00000417131 366 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms