Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL133388.1-201ENST00000404509 287 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL390774.1-201ENST00000411924 246 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC108075.1-201ENST00000424692 529 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 SEPT10P1-201ENST00000517342 1162 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OR4A46P-201ENST00000527255 933 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 PMS2P3-207ENST00000529061 717 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OR4A43P-201ENST00000532938 908 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL049872.1-201ENST00000556323 322 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 RPL10P14-201ENST00000565265 298 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CASC19-260ENST00000641828 2001 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 U3.10-201ENST00000364459 214 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 MIR551A-201ENST00000385042 96 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC096921.1-201ENST00000411661 375 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 REG1CP-206ENST00000447469 496 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 OTX2P1-201ENST00000450956 354 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 SBDSP1-204ENST00000453858 737 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC090638.1-201ENST00000498296 909 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC136777.2-201ENST00000522979 358 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC087783.2-201ENST00000605070 562 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AL121612.2-201ENST00000612261 482 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC068870.2-201ENST00000620635 389 ntBASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
KIAA1549Q9HCM3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 SAMMSON-210ENST00000641260 1308 ntBASIC4.9□□□□□ -1.62
KIAA1549Q9HCM3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 RNU1-19P-201ENST00000363306 165 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 RPL7L1P9-201ENST00000431298 745 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC023271.1-201ENST00000445936 1090 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC008410.1-201ENST00000483777 339 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 HMGB1P44-201ENST00000508597 572 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 BLZF2P-201ENST00000553776 1130 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC127381.1-201ENST00000555979 939 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC069542.2-201ENST00000624816 216 ntBASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 AC140134.1-201ENST00000511830 3544 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms