Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP001000.1-201ENST00000526843 742 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AC130364.2-201ENST00000528639 604 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AC084121.1-201ENST00000533882 835 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AC005479.3-201ENST00000602790 431 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 uc_338.29-201ENST00000615099 168 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 MIR6721-201ENST00000617181 87 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AC026523.2-201ENST00000625039 7739 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AP001157.1-201ENST00000550837 2339 ntBASIC6.66□□□□□ -1.34
UPF2Q9HAU5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF2Q9HAU5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC017079.1-201ENST00000333650 415 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 CYCSP51-201ENST00000443545 318 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AL450023.1-201ENST00000450868 751 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC022133.1-201ENST00000490961 571 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 NPM1P21-201ENST00000513394 762 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC025574.2-201ENST00000615621 514 ntBASIC6.65□□□□□ -1.34
UPF2Q9HAU5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
UPF2Q9HAU5 SSXP3-201ENST00000442971 1300 ntBASIC6.65□□□□□ -1.35
UPF2Q9HAU5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
UPF2Q9HAU5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
UPF2Q9HAU5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
UPF2Q9HAU5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 RNA5SP279-201ENST00000365513 117 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 RNU6-233P-201ENST00000410845 141 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 RPL12P9-201ENST00000412942 488 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC021660.1-201ENST00000465006 554 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC022360.1-201ENST00000521058 340 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 OR4A41P-201ENST00000533053 928 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 MIR4502-201ENST00000580432 81 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC124916.2-201ENST00000604416 224 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC244107.2-201ENST00000611773 76 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC109583.2-201ENST00000617367 129 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 SAMMSON-227ENST00000642114 1199 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AC006484.1-201ENST00000435086 1884 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UPF2Q9HAU5 AP000542.2-201ENST00000623199 6179 ntBASIC6.64□□□□□ -1.35
UPF2Q9HAU5 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms