Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PNRC2P1-201ENST00000423940 420 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC000089.1-201ENST00000424559 801 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 C1DP1-201ENST00000426049 402 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RPL3P11-201ENST00000434028 1146 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 PSMD8P1-201ENST00000436275 769 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RPL23AP44-201ENST00000482216 473 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RN7SL350P-201ENST00000492591 299 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC063943.2-201ENST00000495697 534 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RNA5SP303-201ENST00000516192 130 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AP005902.2-201ENST00000518393 307 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC131935.1-201ENST00000524621 333 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 BTG1P1-201ENST00000540396 508 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC234778.2-201ENST00000566241 354 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC021483.2-201ENST00000567415 758 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC008759.1-201ENST00000589783 983 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC107993.1-201ENST00000591343 684 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL135786.2-201ENST00000608422 615 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC109347.2-201ENST00000610220 349 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL137000.1-201ENST00000610528 1244 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL162574.1-201ENST00000615702 950 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AF246928.1-201ENST00000623768 87 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL359740.1-201ENST00000624340 592 ntBASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SEC61A2Q9H9S3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC009120.2-204ENST00000621548 2032 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC009779.8-201ENST00000641684 4384 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 MTCO1P25-201ENST00000414449 1799 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC092634.1-201ENST00000366505 199 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL451142.1-201ENST00000375867 775 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LDHAP5-201ENST00000394996 622 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 ARSFP1-201ENST00000398758 477 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 OOSP1-201ENST00000398992 1270 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 GSTA12P-201ENST00000402398 508 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU2-17P-201ENST00000410290 190 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC098592.2-201ENST00000413158 265 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CDY17P-201ENST00000414121 1282 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RPS7P12-201ENST00000422385 582 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 PTPN2P1-201ENST00000423212 1072 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RPS4XP16-201ENST00000427198 791 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CDY8P-201ENST00000428380 1279 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AL365220.1-201ENST00000432923 399 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 SNRPBP1-201ENST00000443634 282 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 PFN1P11-201ENST00000445829 389 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 CDY20P-201ENST00000447528 1279 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC244505.3-201ENST00000454598 187 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RPL7P32-201ENST00000457119 744 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC093899.1-201ENST00000457984 376 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-599P-201ENST00000459383 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC115223.1-201ENST00000466377 870 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 RN7SL70P-201ENST00000478322 302 ntBASIC5.94□□□□□ -1.46
SEC61A2Q9H9S3 AC016687.1-201ENST00000482574 353 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms