Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 RPS6P23-201ENST00000413224 722 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC006509.1-201ENST00000420788 634 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 TRGV7-201ENST00000427089 353 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 TPTE2P1-204ENST00000435256 593 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 TREML3P-201ENST00000457327 501 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC093166.4-201ENST00000457867 318 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 RN7SL583P-201ENST00000475692 287 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 SNORD116-30-201ENST00000516468 85 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 RN7SKP5-201ENST00000517045 272 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC008676.3-201ENST00000521237 435 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 AC063977.7-201ENST00000594454 337 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 Z93930.3-201ENST00000607919 749 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.51
VIPAS39Q9H9C1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.59□□□□□ -1.52
VIPAS39Q9H9C1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
VIPAS39Q9H9C1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
VIPAS39Q9H9C1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
VIPAS39Q9H9C1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AL159987.1-201ENST00000347911 293 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AL096711.1-201ENST00000404780 554 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 RPL36AP10-201ENST00000421785 322 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AC128677.1-201ENST00000436016 442 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 GOLGA5P1-201ENST00000507317 980 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 RNA5SP303-201ENST00000516192 130 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 RNA5SP464-201ENST00000516251 108 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 RNU4-18P-201ENST00000516751 149 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 OR8G3P-201ENST00000533406 921 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 MIR6503-201ENST00000622884 86 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 AC002044.3-201ENST00000623314 541 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 PCAT14-202ENST00000627127 3935 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.58□□□□□ -1.52
VIPAS39Q9H9C1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 OR52N3P-201ENST00000413417 934 ntBASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 MARK2P12-201ENST00000420129 585 ntBASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 RNU7-157P-201ENST00000459600 66 ntBASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 RN7SL814P-201ENST00000487715 300 ntBASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AC022133.1-201ENST00000490961 571 ntBASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.57□□□□□ -1.52
VIPAS39Q9H9C1 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms