Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
EBF3Q9H4W6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 RNU4-23P-201ENST00000362839 140 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 MYL6P5-201ENST00000412707 459 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 NME1P1-201ENST00000420914 382 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AL355433.1-201ENST00000422804 300 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC016027.5-201ENST00000427227 210 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC023141.8-201ENST00000442554 208 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 RPS17P15-201ENST00000475609 349 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC010460.2-201ENST00000509054 677 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 OR4A42P-201ENST00000531397 938 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AL049872.1-201ENST00000556323 322 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AL731537.2-201ENST00000561565 951 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 DPPA2P4-201ENST00000563717 878 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 OR7E18P-201ENST00000592589 702 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC027334.1-201ENST00000603257 310 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AP005131.7-201ENST00000610087 611 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC097478.2-201ENST00000610572 514 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC008115.3-201ENST00000614874 549 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 RNA5SP439-201ENST00000617595 124 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AC022306.3-201ENST00000619930 550 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 MIR6719-201ENST00000622428 87 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 CU639417.4-201ENST00000623928 207 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AP003400.2-201ENST00000624036 666 ntBASIC6.02□□□□□ -1.45
EBF3Q9H4W6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.02□□□□□ -1.45
EBF3Q9H4W6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 OR9K1P-201ENST00000326513 941 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 RN7SKP162-201ENST00000363605 345 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 RN7SKP124-201ENST00000364730 341 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 NPM1P4-201ENST00000414095 812 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL596448.1-201ENST00000415024 392 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC009506.2-201ENST00000420635 840 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 TNPO1P1-201ENST00000423641 1138 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL022331.1-201ENST00000429025 477 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AK3P5-201ENST00000432033 519 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 USP24P1-201ENST00000433802 779 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL663074.2-201ENST00000440621 479 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC026348.1-201ENST00000462549 1053 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL157777.1-201ENST00000468100 304 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC108693.1-201ENST00000496068 432 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 IGLV2-28-201ENST00000520681 304 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 IGBP1P1-201ENST00000554337 1009 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 MIR4260-201ENST00000583107 67 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms