Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM4Q9C037 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM4Q9C037 AC133552.1-201ENST00000569988 4007 ntBASIC5.77□□□□□ -1.48
TRIM4Q9C037 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC092376.2-201ENST00000622621 4116 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC119674.1-202ENST00000641333 1860 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL137141.1-201ENST00000624622 4836 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 RN7SKP293-201ENST00000411389 296 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 METTL15P3-201ENST00000415522 1221 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 OR6C64P-201ENST00000419708 825 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 BX323845.3-201ENST00000428215 527 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 FTLP19-201ENST00000433300 394 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL731534.1-201ENST00000434711 269 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 RPL34P33-201ENST00000486062 334 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL589674.2-201ENST00000604304 337 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC141002.1-201ENST00000607025 279 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 AL139407.1-201ENST00000613826 1175 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 AC096708.4-201ENST00000620563 552 ntBASIC5.77□□□□□ -1.49
TRIM4Q9C037 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
TRIM4Q9C037 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM4Q9C037 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 GAPDHP24-201ENST00000328713 983 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 RNFT1P3-201ENST00000340898 1052 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 RN7SKP145-201ENST00000363291 303 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 RNU4-34P-201ENST00000410431 124 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC245060.4-201ENST00000413293 1121 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 PFN1P6-201ENST00000476786 399 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 TRBV5-2-201ENST00000489095 273 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC069304.1-201ENST00000491593 704 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 GLUD1P3-202ENST00000508551 200 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 RPA2P1-201ENST00000556557 721 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 ZNF322P1-201ENST00000568013 1209 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 DPRXP4-201ENST00000578053 568 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC108673.3-201ENST00000609183 335 ntBASIC5.76□□□□□ -1.49
TRIM4Q9C037 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM4Q9C037 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM4Q9C037 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC007342.5-201ENST00000571340 2142 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AL034546.1-201ENST00000623740 3693 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 PSG10P-201ENST00000501199 1500 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms