Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 OR1L6-202ENST00000373684 1044 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC004386.1-201ENST00000393214 761 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 HMGB1P20-201ENST00000402555 677 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC245060.4-201ENST00000413293 1121 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL035660.1-201ENST00000422041 222 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 VDAC2P4-201ENST00000452925 711 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 HLA-DPA3-207ENST00000454398 229 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC093827.1-201ENST00000480094 861 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 IMPA1P1-201ENST00000510718 842 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 SNORA70.20-201ENST00000516848 126 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 RN7SKP183-201ENST00000517169 324 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AP000648.1-201ENST00000529682 397 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 HMGN2P47-201ENST00000559378 272 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 PRPF19P1-201ENST00000584766 898 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL031601.1-201ENST00000605702 394 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL356608.1-201ENST00000610034 820 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AP001052.1-201ENST00000626421 99 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AC099654.6-201ENST00000636487 512 ntBASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDHD3Q9BSH5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 U3.7-201ENST00000363668 216 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 RNA5SP131-201ENST00000365452 119 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 OR7E101P-201ENST00000400428 513 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 RPL12P9-201ENST00000412942 488 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC017078.1-201ENST00000416146 368 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 OR6D1P-201ENST00000436165 939 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC110602.1-201ENST00000437414 318 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC092106.1-201ENST00000444291 373 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC118758.1-202ENST00000454719 225 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC109464.1-201ENST00000511091 819 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 Vault.2-201ENST00000516519 98 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 RNA5SP230-201ENST00000517039 122 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 NMNAT1P5-201ENST00000559657 841 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 LSM1P2-201ENST00000604911 322 ntBASIC4.57□□□□□ -1.68
HDHD3Q9BSH5 AC244107.2-201ENST00000611773 76 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms