Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 SUMO2P5-201ENST00000506790 245 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC069306.1-201ENST00000507006 843 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 RNU6-311P-201ENST00000516224 102 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AP003080.1-202ENST00000526526 915 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AC020915.5-201ENST00000596836 964 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 HULC.1-201ENST00000612720 240 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 VN1R9P-201ENST00000614184 867 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AP000676.3-201ENST00000623299 569 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC092692.1-201ENST00000623625 2595 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC017079.1-201ENST00000333650 415 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 RNU5E-10P-201ENST00000363506 118 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 SNORD8-201ENST00000363915 110 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 SNORA51.9-201ENST00000384295 124 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL7P58-201ENST00000402913 758 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 BTF3L4P1-201ENST00000413813 468 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL35AP31-201ENST00000418340 337 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 QRSL1P2-201ENST00000418582 964 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL12P12-201ENST00000424633 501 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC002069.1-201ENST00000429649 1159 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL138899.2-201ENST00000439139 499 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 ELOCP3-201ENST00000439303 348 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL606490.8-201ENST00000441624 319 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL022237.1-201ENST00000446663 358 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 PPIAP27-201ENST00000453800 265 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC092865.4-201ENST00000477936 615 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC093755.1-201ENST00000512950 1023 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 CR383658.1-201ENST00000514609 734 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AP003396.4-201ENST00000527574 265 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC118942.1-201ENST00000529674 1035 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 OR6M2P-201ENST00000529831 871 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AGGF1P6-201ENST00000569213 976 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC103987.3-201ENST00000582071 292 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC004987.4-201ENST00000603383 338 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC008555.7-201ENST00000605008 583 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 MIR6778-201ENST00000617912 73 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL512652.1-201ENST00000619006 500 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC005609.4-201ENST00000625071 447 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC116667.2-201ENST00000641075 823 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 EIF3EP1-201ENST00000433978 1316 ntBASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP1Q96SZ6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP1Q96SZ6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP1Q96SZ6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.43□□□□□ -1.38
CDK5RAP1Q96SZ6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 319.9 ms