Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPL7AP51-201ENST00000422016 760 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 KIF4CP-201ENST00000422742 1279 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 PCBP2P1-201ENST00000437262 977 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 OR52E3P-201ENST00000452083 936 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC245028.2-201ENST00000458673 253 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 ZNF519P4-201ENST00000514008 125 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 RN7SKP46-201ENST00000515942 234 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AP001000.1-201ENST00000526843 742 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 PMS2P3-207ENST00000529061 717 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC011891.2-201ENST00000604949 397 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC073389.3-201ENST00000609434 935 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 AC010325.3-201ENST00000641084 394 ntBASIC4.15□□□□□ -1.75
AP1S3Q96PC3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
AP1S3Q96PC3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC126323.6-202ENST00000568092 3511 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MIR130A-201ENST00000385274 89 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 VN1R20P-201ENST00000425215 966 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AL389925.1-201ENST00000432257 728 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC092447.2-201ENST00000435487 669 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC073587.1-201ENST00000447093 876 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 IGBP1P3-201ENST00000447449 1000 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 DUTP1-201ENST00000493631 470 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MAST4-IT1-201ENST00000514241 658 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC036111.2-201ENST00000533247 901 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC122688.1-201ENST00000541494 223 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MRPS21P8-201ENST00000569196 235 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MIR4260-201ENST00000583107 67 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 SMIM12P1-201ENST00000603004 274 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 TAS2R6P-201ENST00000605022 826 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC010632.3-201ENST00000611377 369 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AL080312.2-201ENST00000613001 630 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC090607.5-201ENST00000615692 224 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 OR8G7P-201ENST00000616658 848 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 OR11H2-202ENST00000641517 1085 ntBASIC4.14□□□□□ -1.75
AP1S3Q96PC3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.14□□□□□ -1.75
AP1S3Q96PC3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms