Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC008814.1-201ENST00000603797 406 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 CYCSP1-201ENST00000604815 315 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 AC022034.1-201ENST00000512867 2156 ntBASIC8.9□□□□□ -0.99
TOPBP1Q92547 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 OR4F13P-202ENST00000560066 2054 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 RNA5SP479-201ENST00000364858 117 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 AC004074.1-201ENST00000421810 1063 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 RSL24D1P6-201ENST00000426934 401 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 AC112498.1-201ENST00000444401 332 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 OR7E128P-201ENST00000532736 1024 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 AC122688.1-201ENST00000541494 223 ntBASIC8.89□□□□□ -0.99
TOPBP1Q92547 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TOPBP1Q92547 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
TOPBP1Q92547 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 MIR600-201ENST00000385007 98 ntBASIC8.88□□□□□ -0.99
TOPBP1Q92547 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 MTCYBP21-201ENST00000443300 1113 ntBASIC8.88□□□□□ -0.99
TOPBP1Q92547 AC012512.1-201ENST00000446594 718 ntBASIC8.88□□□□□ -0.99
TOPBP1Q92547 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 snoU109.5-201ENST00000516231 132 ntBASIC8.88□□□□□ -0.99
TOPBP1Q92547 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 AC011453.2-201ENST00000603737 729 ntBASIC8.88□□□□□ -0.99
TOPBP1Q92547 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.88□□□□□ -0.99
TOPBP1Q92547 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
TOPBP1Q92547 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 SNORD56.6-201ENST00000384569 71 ntBASIC8.87□□□□□ -0.99
TOPBP1Q92547 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 SLC25A14P1-201ENST00000502867 901 ntBASIC8.87□□□□□ -0.99
TOPBP1Q92547 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 AC019193.2-201ENST00000610012 634 ntBASIC8.87□□□□□ -0.99
TOPBP1Q92547 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
TOPBP1Q92547 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
TOPBP1Q92547 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 AC012519.1-201ENST00000424588 610 ntBASIC8.86□□□□□ -0.99
TOPBP1Q92547 AC007559.1-201ENST00000428736 355 ntBASIC8.86□□□□□ -0.99
TOPBP1Q92547 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 FTH1P8-201ENST00000498161 514 ntBASIC8.86□□□□□ -0.99
TOPBP1Q92547 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 AC005252.1-201ENST00000604518 1063 ntBASIC8.86□□□□□ -0.99
TOPBP1Q92547 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOPBP1Q92547 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.86□□□□□ -0.99
TOPBP1Q92547 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms