Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC099654.14-201ENST00000638599 341 ntBASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHKBP1Q8TBC3 AC022507.1-201ENST00000548349 1505 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC073429.2-201ENST00000569694 1444 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RN7SKP62-201ENST00000384539 329 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 MIR640-201ENST00000385086 96 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RNA5SP474-201ENST00000391234 90 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 BTF3P7-201ENST00000407097 488 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RN7SKP142-201ENST00000411236 328 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC007899.1-201ENST00000412776 775 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 OR6R1P-201ENST00000431838 940 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL138899.2-201ENST00000439139 499 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 PFN1P11-201ENST00000445829 389 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 IGBP1P3-201ENST00000447449 1000 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL109741.2-201ENST00000455561 343 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC135721.2-201ENST00000464237 300 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RPL23AP44-201ENST00000482216 473 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RPS6P4-201ENST00000494693 758 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC005178.1-201ENST00000508392 440 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC098799.2-201ENST00000509466 868 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 C1GALT1P3-201ENST00000522049 819 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 HNRNPCP1-201ENST00000556181 766 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC090616.5-202ENST00000582111 297 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC012175.1-201ENST00000603755 531 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC012368.3-201ENST00000604190 219 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 uc_338.29-201ENST00000615099 168 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC012254.5-201ENST00000623573 478 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC112204.3-201ENST00000623822 332 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC099654.12-201ENST00000639868 649 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC092447.7-201ENST00000422212 1621 ntBASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.11□□□□□ -1.27
SHKBP1Q8TBC3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHKBP1Q8TBC3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms