Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 AL139041.1-201ENST00000605480 610 ntBASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 AL359091.2-201ENST00000609303 556 ntBASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC50Q8IVM0 SMG1P4-204ENST00000523028 4131 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 NACAP7-201ENST00000407371 609 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC115283.1-201ENST00000427353 400 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC069154.1-201ENST00000432914 542 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 RPSAP37-201ENST00000470913 821 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC025458.1-201ENST00000506046 166 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 RN7SKP253-201ENST00000516424 309 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC068305.2-201ENST00000550567 1205 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 MIR4311-201ENST00000580794 100 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 THAP12P5-201ENST00000405864 2275 ntBASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC50Q8IVM0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC079097.1-201ENST00000512187 1399 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 OR9K1P-201ENST00000326513 941 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC004386.1-201ENST00000393214 761 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 OOSP1-201ENST00000398992 1270 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 RPL5P22-201ENST00000480199 884 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC022215.1-201ENST00000481770 362 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AL049874.2-201ENST00000492636 288 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 OR5AM1P-201ENST00000532136 1032 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 HSPE1P2-201ENST00000554777 306 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC093591.2-201ENST00000565254 3843 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 LINC00556-201ENST00000569603 412 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC129778.1-202ENST00000623812 261 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC021766.1-201ENST00000624404 741 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AL390318.1-201ENST00000624564 687 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AL591379.1-207ENST00000635982 261 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 OR8G3P-202ENST00000641572 1255 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms