Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 MTCO1P57-201ENST00000432182 261 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 NDUFA5P1-201ENST00000433858 341 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 RPS7P3-201ENST00000443360 580 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 OR5H7P-201ENST00000514084 930 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 NDUFA5P11-201ENST00000567995 343 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 MIR4776-2-201ENST00000580204 80 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC124856.1-201ENST00000600819 896 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC067773.1-201ENST00000603284 1094 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC145423.1-201ENST00000605712 336 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NUP54Q7Z3B4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.46□□□□□ -1.53
NUP54Q7Z3B4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NUP54Q7Z3B4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 BX284632.2-201ENST00000421091 399 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC022022.1-201ENST00000430304 178 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC114878.1-201ENST00000441166 358 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL512605.1-202ENST00000441919 381 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 HMGN1P2-201ENST00000445197 310 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL359955.2-201ENST00000445380 353 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL035551.1-201ENST00000446931 348 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL591363.1-201ENST00000450091 483 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 ACA64.1-201ENST00000459171 127 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 PFN1P6-201ENST00000476786 399 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC093719.1-201ENST00000480427 441 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC099521.1-201ENST00000482557 334 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 TOMM22P4-201ENST00000511318 336 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC022826.1-201ENST00000519383 805 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC104997.1-201ENST00000519761 717 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 PCNAP4-201ENST00000532690 730 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL121594.2-201ENST00000541658 472 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC087888.1-201ENST00000550884 1254 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 NPM1P42-201ENST00000560329 862 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC009962.1-201ENST00000567327 3813 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 KATNBL1P1-201ENST00000605192 748 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC108865.2-201ENST00000606881 432 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL021918.2-201ENST00000613415 194 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL354696.1-201ENST00000614652 497 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL139099.4-201ENST00000614802 114 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 MIR6778-201ENST00000617912 73 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL445670.1-201ENST00000618889 801 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 MIR1910-201ENST00000636955 80 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AC130304.1-201ENST00000622942 2385 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 AL158152.1-201ENST00000602652 1435 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms