Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC067931.1-201ENST00000624190 671 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VPS13CQ709C8 HSPD1P8-201ENST00000400121 1658 ntBASIC4.27□□□□□ -1.73
VPS13CQ709C8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS13CQ709C8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 C4BPAP2-201ENST00000428434 478 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 Z95152.1-201ENST00000453556 656 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 RPL10P17-201ENST00000453852 316 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC097173.1-201ENST00000505862 819 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC013731.1-201ENST00000604340 883 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC011944.2-201ENST00000624440 683 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 RNU1-74P-201ENST00000384108 171 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 MIR600-201ENST00000385007 98 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 RPL12P20-201ENST00000475538 479 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC079080.1-201ENST00000479841 822 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC013356.1-201ENST00000489027 564 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AP005131.7-201ENST00000610087 611 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 RNA5SP447-201ENST00000363749 119 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 RIMKLBP2-201ENST00000424737 654 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC010618.1-201ENST00000469924 477 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC026688.1-201ENST00000520639 1168 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 AC021483.2-201ENST00000567415 758 ntBASIC4.26□□□□□ -1.73
VPS13CQ709C8 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS13CQ709C8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS13CQ709C8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC008814.1-201ENST00000603797 406 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 MIR208A-201ENST00000362287 71 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 SNORA77-201ENST00000408716 125 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 AL136455.1-201ENST00000441083 1240 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 MIR3667-201ENST00000581025 74 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ZNF652P1-201ENST00000442420 1309 ntBASIC4.25□□□□□ -1.73
VPS13CQ709C8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VPS13CQ709C8 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS13CQ709C8 AC079741.1-201ENST00000321498 212 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms