Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.59□□□□□ -1.52
LYSMD4Q5XG99 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD4Q5XG99 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD4Q5XG99 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.52
LYSMD4Q5XG99 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 WBP11P1-201ENST00000562560 1931 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC007568.1-201ENST00000422912 471 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL590762.4-201ENST00000425885 253 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC005033.1-201ENST00000428904 813 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 ARL4AP4-201ENST00000434170 518 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 LDHAP2-201ENST00000437325 985 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 MTND6P5-201ENST00000448266 512 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC004129.2-201ENST00000457229 287 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 RPL35AP28-201ENST00000459730 331 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC126615.2-201ENST00000553003 515 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL049874.4-201ENST00000557593 255 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC011270.1-201ENST00000558606 583 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 MIR3691-201ENST00000578066 90 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 GMCL1P2-201ENST00000605230 823 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AL049539.1-201ENST00000611964 459 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC005899.7-201ENST00000618199 588 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 AC004836.1-201ENST00000623032 634 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 BX284613.1-201ENST00000452221 1641 ntBASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD4Q5XG99 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RNU4-23P-201ENST00000362839 140 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RNA5SP335-201ENST00000363817 110 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 MIR551A-201ENST00000385042 96 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 MIR130A-201ENST00000385274 89 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC136624.1-201ENST00000400791 413 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AL589647.1-201ENST00000402485 466 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AL139128.1-201ENST00000413921 941 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 VN1R54P-201ENST00000435210 1049 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 OR6D1P-201ENST00000436165 939 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 OR6C72P-201ENST00000451403 892 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RPL7P61-201ENST00000451721 751 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC002075.1-201ENST00000457396 676 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 SEPT7P6-201ENST00000469999 1143 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RN7SL97P-201ENST00000486780 299 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 RPEP1-201ENST00000504507 658 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 OR5D15P-201ENST00000531671 942 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC078878.1-201ENST00000539832 958 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC027667.1-201ENST00000545814 304 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 MIR4646-201ENST00000580775 63 ntBASIC5.57□□□□□ -1.52
LYSMD4Q5XG99 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms